RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCDC15Q0P6D6 951 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 GNPTABQ3T906 1256 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 WLSQ5T9L3 541 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 RNF187Q5TA31 235 aaPredicted RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 FBXW10Q5XX13 1052 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 PPP1R21Q6ZMI0 780 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 CCDC91Q7Z6B0 441 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 EXOC3L1Q86VI1 746 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 BSNDQ8WZ55 320 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 TTC28Q96AY4 2481 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 RBM41Q96IZ5 413 aaKnown RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 CGRRF1Q99675 332 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 ZNF518BQ9C0D4 1074 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 NKX2-4Q9H2Z4 354 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 SLC4A7Q9Y6M7 1214 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 ANK1P16157 1881 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CLDN3O15551 220 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ZNF862O60290 1169 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 SNX3O60493 162 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ATP9AO75110 1047 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 RGS20O76081 388 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 GJB6O95452 261 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CALB1P05937 261 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 IQCF3P0C7M6 154 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 TSHRP16473 764 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 RFC2P35250 354 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 RFC5P40937 340 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CUL2Q13617 745 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 SURF1Q15526 300 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CCDC142Q17RM4 750 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 PREPLQ4J6C6 727 aaPredicted RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 AADACL2Q6P093 401 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 MIS18BP1Q6P0N0 1132 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CYB5D1Q6P9G0 228 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ABHD15Q6UXT9 468 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ARHGEF18Q6ZSZ5 1173 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 TAS1R3Q7RTX0 852 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 DEFB128Q7Z7B8 93 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ZCCHC9Q8N567 271 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 NIPA2Q8N8Q9 360 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ZSWIM2Q8NEG5 633 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 EPS8L3Q8TE67 593 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 CKAP2Q8WWK9 683 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 SAAL1Q96ER3 474 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 CEP170P1Q96L14 293 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 GAS2L1Q99501 681 aaPredicted RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 SELENOSQ9BQE4 189 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 FAM124BQ9H5Z6 455 aaPredicted RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 DHX33Q9H6R0 707 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 JPH1Q9HDC5 661 aaPredicted RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 SSU72Q9NP77 194 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 ASIC3Q9UHC3 531 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 DRG1Q9Y295 367 aaKnown RBP11.38□□□□□ -0.59
RTN3-201ENST00000338850 UNC80Q8N2C7 3258 aa11.38□□□□□ -0.59
RTN3-201ENST00000338850 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 TCRBV7S2A1N4TA0A589 114 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 GOLGA8JA6NMD2 632 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 SPATA31C2B4DYI2 1134 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 MAGEB2O15479 319 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 GAS2O43903 313 aaKnown RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 SUN1O94901 812 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 CLTAP09496 248 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 MYCLP12524 364 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 FGFR4P22455 802 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 KLRC2P26717 231 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 LIG4P49917 911 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 RABGGTBP53611 331 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 PRKCEQ02156 737 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 STRN3Q13033 797 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 BFSP2Q13515 415 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ADGRE1Q14246 886 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 SNCBQ16143 134 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 DGKDQ16760 1214 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 GALNTL6Q49A17 601 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ZC3H12AQ5D1E8 599 aaKnown RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 PLA2G4FQ68DD2 849 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 RNF43Q68DV7 783 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 GDF6Q6KF10 455 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 HIBCHQ6NVY1 386 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 VSTM1Q6UX27 236 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ZPBP2Q6X784 338 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 TRPM8Q7Z2W7 1104 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms