RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 AFF2P51816 1311 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CCL15-CCL14A0A0B4J2E2 113 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 STXBP3O00186 592 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ITGB3P05106 788 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ST13P50502 369 aaKnown RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CCL15Q16663 113 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TRIM10Q9UDY6 481 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 PHF20L1A8MW92 1017 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SH3BGRLO75368 114 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CUL4AQ13619 759 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 DGKKQ5KSL6 1271 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SIKE1Q9BRV8 207 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TBC1D23Q9NUY8 699 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 STAP2Q9UGK3 403 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SATB2Q9UPW6 733 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 A8MX80 341 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 EPHB2P29323 1055 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 HUNKP57058 714 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SLC9A8Q9Y2E8 581 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 KDM5DQ9BY66 1539 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SUPT7LO94864 414 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 GRK3P35626 688 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 KPNA1P52294 538 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 STAT4Q14765 748 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 MTF1Q14872 753 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 ADI1Q9BV57 179 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 M0QYT0 321 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 GRM4Q14833 912 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 DGKDQ16760 1214 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 HPDLQ96IR7 371 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 RIC8BQ9NVN3 520 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 MGAT4DA6NG13 374 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 VCLP18206 1134 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 GPR1P46091 355 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 PSMC6P62333 389 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 NEK10Q6ZWH5 1172 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SYTL1Q8IYJ3 562 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 TFB1MQ8WVM0 346 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 GPRASP2Q96D09 838 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■■■□ 21.1
SHANK2-201ENST00000338508 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 AP3B1O00203 1094 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 MYL4P12829 197 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 PIGHQ14442 188 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 WDR36Q8NI36 951 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 RPRD1BQ9NQG5 326 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 KLHL1Q9NR64 748 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 EIF2S1P05198 315 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 TMED10P49755 219 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 COX10Q12887 443 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 UGP2Q16851 508 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 SGSM1Q2NKQ1 1148 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 PODNQ7Z5L7 613 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 OLFM1Q99784 485 aa12.22□□□□□ -0.45
SHANK2-201ENST00000338508 EIF3LQ9Y262 564 aaKnown RBP12.22□□□□□ -0.45
SHANK2-201ENST00000338508 TRIM43BA6NCK2 446 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 B2RBV5 119 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 KRT16P08779 473 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 AP3M2P53677 418 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 PTK6Q13882 451 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
SHANK2-201ENST00000338508 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 UGT3A1Q6NUS8 523 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-201ENST00000338508 RNF180Q86T96 592 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 IZUMO1Q8IYV9 350 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 SERAC1Q96JX3 654 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 PARK7Q99497 189 aaKnown RBP12.21□□□□□ -0.45
SHANK2-201ENST00000338508 AAASQ9NRG9 546 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 SLC38A7Q9NVC3 462 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 SESN1Q9Y6P5 492 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 ATP6V1B2P21281 511 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 PTGER2P43116 358 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 SEMA3FQ13275 785 aa12.21□□□□□ -0.45
SHANK2-201ENST00000338508 CALR3Q96L12 384 aaKnown RBP12.21□□□□□ -0.45
SHANK2-201ENST00000338508 RANBP17Q9H2T7 1088 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms