RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CHRDQ9H2X0 955 aa14.33□□□□□ -0.12
NUDCD3-201ENST00000338427 FBRSL1Q9HCM7 1045 aaKnown RBP14.33□□□□□ -0.12
NUDCD3-201ENST00000338427 POLR3BQ9NW08 1133 aaPredicted RBP14.33□□□□□ -0.12
NUDCD3-201ENST00000338427 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
NUDCD3-201ENST00000338427 ATG2BQ96BY7 2078 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 KIF26AQ9ULI4 1882 aaPredicted RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ACTN4O43707 911 aaKnown RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 FGF19O95750 216 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 TDGF1P13385 188 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ARSAP15289 507 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 LHX1P48742 406 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 MYL6P60660 151 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 PSMD6Q15008 389 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 SURF1Q15526 300 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 LPAL2Q16609 132 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ZNF528Q3MIS6 628 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ARHGAP29Q52LW3 1261 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 NAIF1Q69YI7 327 aaPredicted RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 SPATA2LQ8IUW3 424 aaPredicted RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 CELF5Q8N6W0 485 aaKnown RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 XXYLT1Q8NBI6 393 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 ATRIPQ8WXE1 791 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 NELL1Q92832 810 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 GCNAQ96QF7 691 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 SEMA4AQ9H3S1 761 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 EBF3Q9H4W6 596 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 TRPC7Q9HCX4 862 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 HPS4Q9NQG7 708 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 R3HCC1Q9Y3T6 440 aaKnown RBP14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 GPR179Q6PRD1 2367 aa14.32□□□□□ -0.12
NUDCD3-201ENST00000338427 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 SPTBN4Q9H254 2564 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 PVALEFA0A1B0GWK0 134 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 KIAA0391O15091 583 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 NOL4O94818 638 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CSH1P0DML2 217 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CSH2P0DML3 217 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CTHP32929 405 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 GNL1P36915 607 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 MAGEA9P43362 315 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CACNA2D1P54289 1103 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CDH8P55286 799 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 USP46P62068 366 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 RPL10AP62906 217 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 MYO1EQ12965 1108 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 SRSF5Q13243 272 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 PKN3Q6P5Z2 889 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 ARL14EPQ8N8R7 260 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 LEO1Q8WVC0 666 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 MYLPFQ96A32 169 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CHFRQ96EP1 664 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CGRRF1Q99675 332 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 FAM83CQ9BQN1 747 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 DPEP3Q9H4B8 488 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 KIAA1586Q9HCI6 787 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 PRMT8Q9NR22 394 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 TDP1Q9NUW8 608 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 ZSCAN32Q9NX65 697 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 OBP2AQ9NY56 170 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 MAGEC2Q9UBF1 373 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 NXF1Q9UBU9 619 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
NUDCD3-201ENST00000338427 C2orf78A6NCI8 922 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 ANTXRLA6NF34 631 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CHURC1-FNTBB4DL54 471 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CLDN5O00501 218 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 LILRB5O75023 590 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 WARSP23381 471 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 PCSK1P29120 753 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 WEE1P30291 646 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 AVPR1AP37288 418 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 GRIK1P39086 918 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CXCL12P48061 93 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 FNTBP49356 437 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 KNOP1Q1ED39 458 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 WDR72Q3MJ13 1102 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 MDH1BQ5I0G3 518 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 HEATR6Q6AI08 1181 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 ZC3H14Q6PJT7 736 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 DPH6Q7L8W6 267 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CEP57L1Q8IYX8 460 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 MRPS31Q92665 395 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 FNBP1Q96RU3 617 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 CDH9Q9ULB4 789 aa14.3□□□□□ -0.12
NUDCD3-201ENST00000338427 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms