RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 TRIM31Q9BZY9 425 aa9.46□□□□□ -0.9
TREM1-202ENST00000334475 STMN4Q9H169 189 aaPredicted RBP9.46□□□□□ -0.9
TREM1-202ENST00000334475 SIX4Q9UIU6 781 aa9.46□□□□□ -0.9
TREM1-202ENST00000334475 VCANP13611 3396 aa9.46□□□□□ -0.9
TREM1-202ENST00000334475 SMIM35A0A1B0GVV1 85 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CILPO75339 1184 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 TJP3O95049 919 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 HMGCRP04035 888 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 ITGB3P05106 788 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 GJB1P08034 283 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CFHP08603 1231 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 KRT19P08727 400 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 KRT7P08729 469 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 SETSIPP0DME0 302 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 SMPD1P17405 629 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 GRK4P32298 578 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 FLT3P36888 993 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 GABRB2P47870 512 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 RAD23BP54727 409 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 TRIM32Q13049 653 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CNGA2Q16280 664 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 HADHQ16836 314 aaKnown RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 SLC10A6Q3KNW5 377 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 TMEM63BQ5T3F8 832 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 JADE1Q6IE81 842 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 RHBDF2Q6PJF5 856 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 LRRC31Q6UY01 552 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CPNE8Q86YQ8 564 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CXorf38Q8TB03 319 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 PGM2Q96G03 612 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 TMEM176AQ96HP8 235 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 NCAPGQ9BPX3 1015 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 GCOM2Q9BZD3 368 aaPredicted RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 ROPN1BQ9BZX4 212 aaPredicted RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 TRIM7Q9C029 511 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 DNAI2Q9GZS0 605 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 CNOT10Q9H9A5 744 aaKnown RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 ROPN1Q9HAT0 212 aaPredicted RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 BARX2Q9UMQ3 279 aaPredicted RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 DRG1Q9Y295 367 aaKnown RBP9.45□□□□□ -0.9
TREM1-202ENST00000334475 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 Q9Y3F1 56 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
TREM1-202ENST00000334475 DOCK3Q8IZD9 2030 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 LAMA2P24043 3122 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 TCRBV7S2A1N4TA0A589 114 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 A6NJR5 290 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 XPOTO43592 962 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 F2P00734 622 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 VTNP04004 478 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 KRT1P04264 644 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 RALAP11233 206 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 ATF2P15336 505 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 CD19P15391 556 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 MDH1P40925 334 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 IRAK1P51617 712 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 HNRNPH2P55795 449 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 SNX16P57768 344 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 OSTNP61366 133 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 GNGT1P63211 74 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 MYO1EQ12965 1108 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 NFX1Q12986 1120 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 BYSLQ13895 437 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 KRT71Q3SY84 523 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 ODF2Q5BJF6 829 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 MORN1Q5T089 497 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 MARCH8Q5T0T0 291 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 GJC2Q5T442 439 aaPredicted RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 SCARA5Q6ZMJ2 495 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 ZNF365Q70YC5 407 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 RELL1Q8IUW5 271 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 KIAA0319LQ8IZA0 1049 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 WDTC1Q8N5D0 677 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 SLC4A11Q8NBS3 891 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 TFAP2BQ92481 460 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 TLCD1Q96CP7 247 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 SCLT1Q96NL6 688 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 MCEEQ96PE7 176 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 SLITRK1Q96PX8 696 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 RNF208Q9H0X6 261 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 CHST7Q9NS84 486 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 DPP3Q9NY33 737 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 ASIC3Q9UHC3 531 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
TREM1-202ENST00000334475 POLIQ9UNA4 740 aa9.44□□□□□ -0.9
TREM1-202ENST00000334475 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.44□□□□□ -0.9
TREM1-202ENST00000334475 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms