RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 INSL5Q9Y5Q6 135 aa27.61■■■□□ 2.01
SMDT1-201ENST00000331479 CCDC130P13994 396 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 MGAT5BQ3V5L5 792 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 CFAP221Q4G0U5 840 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 PPM1LQ5SGD2 360 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 RARS2Q5T160 578 aaKnown RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 TMC5Q6UXY8 1006 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 C4orf50Q6ZRC1 276 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 PAQR9Q6ZVX9 377 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 HEXIM2Q96MH2 286 aaKnown RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 S1PR5Q9H228 398 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 CDH22Q9UJ99 828 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 CNTN6Q9UQ52 1028 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 YIPF1Q9Y548 306 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 CCDC195A0A1B0GUA6 201 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 HAPLN1P10915 354 aaPredicted RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 HOXB8P17481 243 aaPredicted RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 BDNFP23560 247 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 ELMSAN1Q6PJG2 1045 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 FUKQ8N0W3 1084 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 RBBP8NLQ8NC74 664 aaPredicted RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 SHC3Q92529 594 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 SEPT5Q99719 369 aaPredicted RBP27.6■■■□□ 2.01
SMDT1-201ENST00000331479 ZNF518BQ9C0D4 1074 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 GPR88Q9GZN0 384 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 ABCB6Q9NP58 842 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 HSFX1Q9UBD0 423 aa27.6■■■□□ 2.01
SMDT1-201ENST00000331479 PTPRDP23468 1912 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 CALCAP01258 141 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 PNMA6AP0CW24 399 aaPredicted RBP27.59■■■□□ 2.01
SMDT1-201ENST00000331479 KRT5P13647 590 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 ZNF132P52740 706 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 TWF1Q12792 350 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 RAPGEF1Q13905 1077 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 SLC2A14Q8TDB8 520 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 ZNF707Q96C28 371 aaPredicted RBP27.59■■■□□ 2.01
SMDT1-201ENST00000331479 FUBP3Q96I24 572 aaKnown RBP eCLIP27.59■■■□□ 2.01
SMDT1-201ENST00000331479 XPO4Q9C0E2 1151 aaKnown RBP27.59■■■□□ 2.01
SMDT1-201ENST00000331479 ZDHHC7Q9NXF8 308 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 COG5Q9UP83 839 aa27.59■■■□□ 2.01
SMDT1-201ENST00000331479 CCL16O15467 120 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 GPR15P49685 360 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 CACNA2D1P54289 1103 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 POLR2FP61218 127 aaKnown RBP27.58■■■□□ 2.01
SMDT1-201ENST00000331479 TFF2Q03403 129 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 RTL10Q7L3V2 364 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 NEK11Q8NG66 645 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 CYFIP2Q96F07 1278 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 TMEM30AQ9NV96 361 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 UNC80Q8N2C7 3258 aa27.58■■■□□ 2.01
SMDT1-201ENST00000331479 A0A1W2PQC6 194 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 FOXN3O00409 490 aaPredicted RBP27.57■■■□□ 2
SMDT1-201ENST00000331479 AP5Z1O43299 807 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 PAPLNO95428 1278 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 HOXA9P31269 272 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 TUFMP49411 452 aaKnown RBP27.57■■■□□ 2
SMDT1-201ENST00000331479 DRAP1Q14919 205 aaPredicted RBP27.57■■■□□ 2
SMDT1-201ENST00000331479 PPP1R26Q5T8A7 1209 aaPredicted RBP27.57■■■□□ 2
SMDT1-201ENST00000331479 SMRP1Q8NCR6 262 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 CMASQ8NFW8 434 aaPredicted RBP27.57■■■□□ 2
SMDT1-201ENST00000331479 MED10Q9BTT4 135 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 PRKD2Q9BZL6 878 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 CD207Q9UJ71 328 aa27.57■■■□□ 2
SMDT1-201ENST00000331479 HNRNPA1P09651 372 aaKnown RBP eCLIP27.56■■■□□ 2
SMDT1-201ENST00000331479 ATF6P18850 670 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 TRIM21P19474 475 aaKnown RBP27.56■■■□□ 2
SMDT1-201ENST00000331479 RFX1P22670 979 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 USP8P40818 1118 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 DDR2Q16832 855 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 FAM35AQ86V20 835 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 STK33Q9BYT3 514 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 ADAM7Q9H2U9 754 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 ACP6Q9NPH0 428 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 NLRC4Q9NPP4 1024 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 LRG1P02750 347 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 PAEPP09466 180 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 ADORA2BP29275 332 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 PBX1P40424 430 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 MAGEA11P43364 429 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 SDHAF4Q5VUM1 108 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 GPR152Q8TDT2 470 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 TFAP2BQ92481 460 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 HNRNPABQ99729 332 aaKnown RBP27.56■■■□□ 2
SMDT1-201ENST00000331479 ZSWIM1Q9BR11 485 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 DNAI2Q9GZS0 605 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 CEP72Q9P209 647 aa27.56■■■□□ 2
SMDT1-201ENST00000331479 CD19P15391 556 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 ALDH1A3P47895 512 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 PLCB2Q00722 1185 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 VSTM1Q6UX27 236 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 GPR149Q86SP6 731 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 SCN4BQ8IWT1 228 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 C2orf16Q68DN1 1984 aa27.55■■■□□ 2
SMDT1-201ENST00000331479 ARHGAP17Q68EM7 881 aa27.54■■■□□ 2
SMDT1-201ENST00000331479 STKLD1Q8NE28 680 aa27.54■■■□□ 2
SMDT1-201ENST00000331479 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.54■■■□□ 2
SMDT1-201ENST00000331479 GIPC2Q8TF65 315 aa27.54■■■□□ 2
SMDT1-201ENST00000331479 SMG7Q92540 1137 aaKnown RBP27.54■■■□□ 2
SMDT1-201ENST00000331479 GRXCR2A6NFK2 248 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 F8VZ95 297 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms