RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ACOT2P49753 483 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 C1orf146Q5VVC0 180 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 EZH1Q92800 747 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 CCDC124Q96CT7 223 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 MCEEQ96PE7 176 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 OCEL1Q9H607 264 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TDRD3Q9H7E2 651 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 KCNH7Q9NS40 1196 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ATRNL1Q5VV63 1379 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 E5RJQ4 531 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 ITGB5P18084 799 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 YWHABP31946 246 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 GDF10P55107 478 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 MCL1Q07820 350 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 MAMLD1Q13495 774 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TCEAL1Q15170 157 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 WDR72Q3MJ13 1102 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 BRDTQ58F21 947 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SRPK1Q96SB4 655 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 SAR1AQ9NR31 198 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 CLUHO75153 1309 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 MYPNQ86TC9 1320 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 TNRC6CQ9HCJ0 1690 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 ABHD2P08910 425 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CDK16Q00536 496 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 ARID3BQ8IVW6 561 aaPredicted RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 USP6NLQ92738 828 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 SPATA31A5Q5VU36 1347 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 SPATA31A6Q5VVP1 1343 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 SPATA31A7Q8IWB4 1347 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CIB2O75838 187 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 LYNP07948 512 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 GNA15P30679 374 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 EPHB1P54762 984 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 AP1B1Q10567 949 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 RIPOR1Q6ZS17 1223 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 PYDC1Q8WXC3 89 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CFAP36Q96G28 342 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 OXNAD1Q96HP4 312 aaPredicted RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 ACAP3Q96P50 834 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 FNBP1Q96RU3 617 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 STRA6Q9BX79 667 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 KMT5AQ9NQR1 393 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 SENP1Q9P0U3 644 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 KIAA1522Q9P206 1035 aaPredicted RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 GABBR1Q9UBS5 961 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 FAM198AQ9UFP1 575 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 LNPEPQ9UIQ6 1025 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 RABGEF1Q9UJ41 708 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 TBX20Q9UMR3 447 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CCDC160A6NGH7 325 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 RTP1P59025 263 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 PSMC5P62195 406 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 FAAP100Q0VG06 881 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 PTK7Q13308 1070 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 CYP4A22Q5TCH4 519 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 MTHFD1LQ6UB35 978 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 ARHGAP22Q7Z5H3 698 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 METTL3Q86U44 580 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 RBM15BQ8NDT2 890 aaKnown RBP8.26□□□□□ -1.09
VMA21-201ENST00000330374 SERAC1Q96JX3 654 aa8.26□□□□□ -1.09
VMA21-201ENST00000330374 TRAFD1O14545 582 aaPredicted RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 AVILO75366 819 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 PHBP35232 272 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SCNN1AP37088 669 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 TMPRSS15P98073 1019 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 OCRLQ01968 901 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 RNASEH2BQ5TBB1 312 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 SCARA3Q6AZY7 606 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ZCCHC23Q6ZST2 131 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 TREML1Q86YW5 311 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ALLCQ8N6M5 410 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 POU5F2Q8N7G0 328 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 EXD1Q8NHP7 514 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 CCDC110Q8TBZ0 833 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 RSAD2Q8WXG1 361 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 AGBL1Q96MI9 1066 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SLITRK1Q96PX8 696 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 NDE1Q9NXR1 346 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 STX18Q9P2W9 335 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PCDHB2Q9Y5E7 798 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 ALOX15BO15296 676 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 MAP3K6O95382 1288 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 CYP1A1P04798 512 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms