RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 CSH1P0DML2 217 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 CSH2P0DML3 217 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 CDC25CP30307 473 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 FMO5P49326 533 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 INCA1Q0VD86 236 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 CCDC142Q17RM4 750 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 RBM43Q6ZSC3 357 aaKnown RBP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 UBALD2Q8IYN6 164 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 HS6ST3Q8IZP7 471 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 KHSRPQ92945 711 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 CNOT6LQ96LI5 555 aaKnown RBP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 CEP295NLQ96MC4 621 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 SDCBP2Q9H190 292 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 DPEP3Q9H4B8 488 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 SLITRK6Q9H5Y7 841 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 APOBEC3GQ9HC16 384 aaKnown RBP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 UXTQ9UBK9 157 aaPredicted RBP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 LIMD1Q9UGP4 676 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 COQ4Q9Y3A0 265 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 NME7Q9Y5B8 376 aa15.8■□□□□ 0.12
CLRN1-203ENST00000328863 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLRN1-203ENST00000328863 MYO10Q9HD67 2058 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 ATP2C2O75185 946 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 AFPP02771 609 aaKnown RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 PTPN1P18031 435 aaKnown RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 CYP2F1P24903 491 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 GABRR2P28476 465 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 ERCC5P28715 1186 aaPredicted RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 CDR1P51861 262 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 CDH8P55286 799 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 YWHAEP62258 255 aaKnown RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 TDGQ13569 410 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 HTR4Q13639 388 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 ARHGAP15Q53QZ3 475 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 CT47A1Q5JQC4 288 aaPredicted RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 DNAJB7Q7Z6W7 309 aaPredicted RBP15.79■□□□□ 0.12
CLRN1-203ENST00000328863 TRIM59Q8IWR1 403 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 GIPC2Q8TF65 315 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 ELMO3Q96BJ8 720 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 GPR88Q9GZN0 384 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 KCNK12Q9HB15 430 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 EHD2Q9NZN4 543 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 DUSP12Q9UNI6 340 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 NUMBLQ9Y6R0 609 aa15.79■□□□□ 0.12
CLRN1-203ENST00000328863 A0A1W2PRU2 124 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 PMM2O15305 246 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 CD58P19256 250 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 PTMSP20962 102 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 BDNFP23560 247 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 TBXAS1P24557 533 aaPredicted RBP15.78■□□□□ 0.12
CLRN1-203ENST00000328863 GRIK1P39086 918 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 CCR2P41597 374 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 GPR15P49685 360 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 NDST1P52848 882 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 ZXDAP98168 799 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 SIGLEC14Q08ET2 396 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 SASS6Q6UVJ0 657 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 FAM35AQ86V20 835 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 SHKBP1Q8TBC3 707 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 EDAQ92838 391 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 SEMA4DQ92854 862 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 TCEAL4Q96EI5 215 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 SMARCD1Q96GM5 515 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 NT5C1BQ96P26 610 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 MED10Q9BTT4 135 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 NT5C1AQ9BXI3 368 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 ATXN3LQ9H3M9 355 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 EPHX3Q9H6B9 360 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 ZNF334Q9HCZ1 680 aaPredicted RBP15.78■□□□□ 0.12
CLRN1-203ENST00000328863 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 ZMYM5Q9UJ78 669 aa15.78■□□□□ 0.12
CLRN1-203ENST00000328863 ZNF638Q14966 1978 aaKnown RBP15.78■□□□□ 0.12
CLRN1-203ENST00000328863 HELZP42694 1942 aaKnown RBP15.77■□□□□ 0.12
CLRN1-203ENST00000328863 ANHXE9PGG2 379 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 CILPO75339 1184 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 NOL4O94818 638 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 TEAD2Q15562 447 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 STX1AQ16623 288 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 DDR2Q16832 855 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 ACOT1Q86TX2 421 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 MCRS1Q96EZ8 462 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 TRMT2BQ96GJ1 504 aaKnown RBP15.77■□□□□ 0.12
CLRN1-203ENST00000328863 LRRC3Q9BY71 257 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 ZNF518BQ9C0D4 1074 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 THAP9Q9H5L6 903 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 DMAP1Q9NPF5 467 aaPredicted RBP15.77■□□□□ 0.12
CLRN1-203ENST00000328863 KRT82Q9NSB4 513 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 ANO10Q9NW15 660 aa15.77■□□□□ 0.12
CLRN1-203ENST00000328863 MAGED2Q9UNF1 606 aaPredicted RBP15.77■□□□□ 0.12
CLRN1-203ENST00000328863 SLC38A8A6NNN8 435 aa15.76■□□□□ 0.11
CLRN1-203ENST00000328863 GJA1P17302 382 aa15.76■□□□□ 0.11
CLRN1-203ENST00000328863 DDX6P26196 483 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLRN1-203ENST00000328863 MTIF2P46199 727 aaKnown RBP15.76■□□□□ 0.11
CLRN1-203ENST00000328863 KCNH2Q12809 1159 aa15.76■□□□□ 0.11
CLRN1-203ENST00000328863 CUL2Q13617 745 aa15.76■□□□□ 0.11
CLRN1-203ENST00000328863 TMEM31Q5JXX7 168 aa15.76■□□□□ 0.11
CLRN1-203ENST00000328863 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms