RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 TRIM72Q6ZMU5 477 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 CTU1Q7Z7A3 348 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 CCDC33Q8N5R6 958 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PRELID2Q8N945 189 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 CLEC4CQ8WTT0 213 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 ZNF296Q8WUU4 475 aaPredicted RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 KCNN1Q92952 543 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 SNX25Q9H3E2 840 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 CNTN6Q9UQ52 1028 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PCDHA3Q9Y5H8 950 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 TRPV2Q9Y5S1 764 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PTGESO14684 152 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 MED7O43513 233 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 CTNNA1P35221 906 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 C1QBPQ07021 282 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 PAK2Q13177 524 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PDCLQ13371 301 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PPP1R7Q15435 360 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 WSCD1Q658N2 575 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PMF1Q6P1K2 205 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 PHF13Q86YI8 300 aaPredicted RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 SLC13A5Q86YT5 568 aaPredicted RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 OR2W6PQ8NHA6 318 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 TRIM11Q96F44 468 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 UBQLN1Q9UMX0 589 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.62□□□□□ -0.87
CD46-202ENST00000322918 SCINQ9Y6U3 715 aa9.62□□□□□ -0.87
CD46-202ENST00000322918 RANBP2P49792 3224 aaKnown RBP9.62□□□□□ -0.87
CD46-202ENST00000322918 TARSL2A2RTX5 802 aaKnown RBP9.61□□□□□ -0.87
CD46-202ENST00000322918 HUS1O60921 280 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CALB1P05937 261 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 ACLYP53396 1101 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 ENPEPQ07075 957 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 PLEKHA7Q6IQ23 1121 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 RNF180Q86T96 592 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 APPL2Q8NEU8 664 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CCDC26Q8TAB7 109 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CD101Q93033 1021 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 GLT1D1Q96MS3 346 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
CD46-202ENST00000322918 GPATCH2LQ9NWQ4 482 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.61□□□□□ -0.87
CD46-202ENST00000322918 FAN1Q9Y2M0 1017 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 UTP11Q9Y3A2 253 aaKnown RBP9.61□□□□□ -0.87
CD46-202ENST00000322918 Q9Y3F1 56 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 MRPL42Q9Y6G3 142 aaKnown RBP9.61□□□□□ -0.87
CD46-202ENST00000322918 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 SMIM23A6NLE4 172 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 HMGCRP04035 888 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 MYBL1P10243 752 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 ATICP31939 592 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 GGCXP38435 758 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 BCAR1P56945 870 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CORO7P57737 925 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CDC42EP1Q00587 391 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 HSP90B2PQ58FF3 399 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 SYCP2LQ5T4T6 812 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 KCTD16Q68DU8 428 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 RASGEF1CQ8N431 466 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 RAPGEF5Q92565 580 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CFAP57Q96MR6 1250 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 DDX20Q9UHI6 824 aaKnown RBP9.61□□□□□ -0.87
CD46-202ENST00000322918 SIP14410 1827 aa9.61□□□□□ -0.87
CD46-202ENST00000322918 TMEM191CA6NGB0 347 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 ARL5CA6NH57 179 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 CYB561D2O14569 222 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 CD48P09326 243 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 GPD2P43304 727 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 LILRA4P59901 499 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 TUBB4BP68371 445 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 MFSD7Q6UXD7 560 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 GSTA5Q7RTV2 222 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 MAATS1Q7Z4T9 603 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 CCDC91Q7Z6B0 441 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 SERINC5Q86VE9 423 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 UBLCP1Q8WVY7 318 aaPredicted RBP9.6□□□□□ -0.87
CD46-202ENST00000322918 FAM149B1Q96BN6 582 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 MED10Q9BTT4 135 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
CD46-202ENST00000322918 TMEM59LQ9UK28 342 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 PTCH2Q9Y6C5 1203 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 KIAA0100Q14667 2235 aaKnown RBP9.6□□□□□ -0.87
CD46-202ENST00000322918 B3GAT3O94766 335 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 KRT14P02533 472 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 VDRP11473 427 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 MCM3P25205 808 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 BRCC3P46736 316 aa9.6□□□□□ -0.87
CD46-202ENST00000322918 TAF6P49848 677 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms