RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PPM1NQ8N819 430 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 CPT1BQ92523 772 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 ITFG2Q969R8 447 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 PTCD3Q96EY7 689 aaKnown RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 PANX3Q96QZ0 392 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 BTBD10Q9BSF8 475 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 ASCC2Q9H1I8 757 aaPredicted RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 NYAP2Q9P242 653 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 WDR35Q9P2L0 1181 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 AGTPBP1Q9UPW5 1226 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 PRR5-ARHGAP8B1AHC4 643 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ZNF862O60290 1169 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CST8O60676 142 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 DCTN3O75935 186 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CHRNA5P30532 468 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 VHLP40337 213 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 GRIA2P42262 883 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RPS6KA3P51812 740 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ARHGAP8P85298 464 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CYP24A1Q07973 514 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MTERF2Q49AM1 385 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RNASEH2BQ5TBB1 312 aaKnown RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 C1orf228Q6PIY5 440 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RNF111Q6ZNA4 994 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ATG14Q6ZNE5 492 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 TMEM179Q6ZVK1 233 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 TAS1R3Q7RTX0 852 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RHOT1Q8IXI2 618 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ATXN7L3BQ96GX2 97 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CEP170P1Q96L14 293 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MXRA8Q9BRK3 442 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CLIC5Q9NZA1 410 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 COL16A1Q07092 1604 aaPredicted RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 ARHGAP42A6NI28 874 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 LUC7L3O95232 432 aaKnown RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 MCL1Q07820 350 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MTMR1Q13613 665 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ACVR2BQ13705 512 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 LAMB3Q13751 1172 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RBBP5Q15291 538 aaKnown RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 PARP6Q2NL67 630 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 BRDTQ58F21 947 aaPredicted RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 FYB2Q5VWT5 728 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 PALM2Q8IXS6 379 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 SEPT12Q8IYM1 358 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RILPQ96NA2 401 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CEP41Q9BYV8 373 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 PSMC3IPQ9P2W1 217 aaPredicted RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 RNF8O76064 485 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 TJP3O95049 919 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 FOSP01100 380 aaPredicted RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 GSTT1P30711 240 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 RPL22P35268 128 aaKnown RBP10.09□□□□□ -0.79
RPGR-201ENST00000318842 GRIA1P42261 906 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 GTF2A2P52657 109 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 NOMO3P69849 1222 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 PDE1BQ01064 536 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 PTK7Q13308 1070 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 NCOA4Q13772 614 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 SLC15A2Q16348 729 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 CCNG2Q16589 344 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MROH9Q5TGP6 573 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 DENND5BQ6ZUT9 1274 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 TEX9Q8N6V9 391 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 TFAP2BQ92481 460 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 ERLEC1Q96DZ1 483 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 APOL6Q9BWW8 343 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 DCLRE1BQ9H816 532 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 XPNPEP1Q9NQW7 623 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MAN1C1Q9NR34 630 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPGR-201ENST00000318842 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
RPGR-201ENST00000318842 MYH9P35579 1960 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 OPHN1O60890 802 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 FESP07332 822 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 GJB1P08034 283 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 VIL1P09327 827 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 C6orf222P0C671 652 aaPredicted RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 RFC1P35251 1148 aaPredicted RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 AQP5P55064 265 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 INHBCP55103 352 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 CDH8P55286 799 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 CRY2Q49AN0 593 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 CC2D2BQ6DHV5 1058 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 TATDN1Q6P1N9 297 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 SPOCD1Q6ZMY3 1216 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 RGS9BPQ6ZS82 235 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms