RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 DUX4L4P0CJ87 422 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 DUX4L5P0CJ88 424 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 DUX4L6P0CJ89 424 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 DUX4L7P0CJ90 424 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 GPD1P21695 349 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 EFNA5P52803 228 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 TUFT1Q9NNX1 390 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 PAPOLBQ9NRJ5 636 aaKnown RBP21.75■■□□□ 1.07
KDM3B-201ENST00000314358 DUX4Q9UBX2 424 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 NPTXRO95502 500 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 USP11P51784 963 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 CRB1P82279 1406 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 TRIM49D1C9J1S8 452 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 AP3M2P53677 418 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 EPS8L3Q8TE67 593 aaKnown RBP21.75■■□□□ 1.07
KDM3B-201ENST00000314358 KLHL25Q9H0H3 589 aa21.75■■□□□ 1.07
KDM3B-201ENST00000314358 TRAPPC3O43617 180 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 TP53BP2Q13625 1128 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 NFIL3Q16649 462 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 UGP2Q16851 508 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 PTGER2P43116 358 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 OTUD4Q01804 1114 aaKnown RBP21.74■■□□□ 1.07
KDM3B-201ENST00000314358 TRIM32Q13049 653 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ATP6V1B2P21281 511 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 EMC2Q15006 297 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 CENPLQ8N0S6 344 aaPredicted RBP21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ATG4AQ8WYN0 398 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 SNX13Q9Y5W8 968 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ITGA4P13612 1032 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 CINPQ9BW66 212 aaPredicted RBP21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ADGRB3O60242 1522 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 STRNO43815 780 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 RPS6KA5O75582 802 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 MT-CO1P00395 513 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 PCNAP12004 261 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 CTCFP49711 727 aaPredicted RBP21.74■■□□□ 1.07
KDM3B-201ENST00000314358 PRKCQQ04759 706 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 SGSM1Q2NKQ1 1148 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 TMEM106CQ9BVX2 250 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 INTS13Q9NVM9 706 aa21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.74■■□□□ 1.07
KDM3B-201ENST00000314358 ZNF682O95780 498 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CCND1P24385 295 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 GPC1P35052 558 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 STK4Q13043 487 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 TMED8Q6PL24 325 aaPredicted RBP21.73■■□□□ 1.07
KDM3B-201ENST00000314358 GRID1Q9ULK0 1009 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CSNK2BP67870 215 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 DSG1Q02413 1049 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 TTC39CQ8N584 583 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 RAD9BQ6WBX8 426 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CHST12Q9NRB3 414 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 TADA1Q96BN2 335 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 MRPS26Q9BYN8 205 aaKnown RBP21.73■■□□□ 1.07
KDM3B-201ENST00000314358 RIC8BQ9NVN3 520 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 PAK5Q9P286 719 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CYP7B1O75881 506 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 COPAP53621 1224 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 USP39Q53GS9 565 aaKnown RBP21.73■■□□□ 1.07
KDM3B-201ENST00000314358 KCNT1Q5JUK3 1230 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 EFCAB12Q6NXP0 572 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 STOX1Q6ZVD7 989 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 PRUNE1Q86TP1 453 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CATSPERBQ9H7T0 1116 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 N6AMT1Q9Y5N5 214 aa21.73■■□□□ 1.07
KDM3B-201ENST00000314358 CCT8L1PA6NM43 557 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 CCZ1BP86790 482 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 CCZ1P86791 482 aaPredicted RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 NFIXQ14938 502 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 APOL2Q9BQE5 337 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 HEY2Q9UBP5 337 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 SRGNP10124 158 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 CDC42BPAQ5VT25 1732 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 ISLR2Q6UXK2 745 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 B3GALNT2Q8NCR0 500 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 NT5C1AQ9BXI3 368 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 E9PBE3 544 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 ATF7IP2Q5U623 682 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 LRIG3Q6UXM1 1119 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 LRRC34Q8IZ02 419 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 ASB14A6NK59 587 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 PRKCEQ02156 737 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 AASDHQ4L235 1098 aaPredicted RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 PARVBQ9HBI1 364 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 MAN1C1Q9NR34 630 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 NR5A2O00482 541 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 ITGB3P05106 788 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 HARS2P49590 506 aaKnown RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 CALML6Q8TD86 181 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 NMD3Q96D46 503 aaKnown RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 RNF17Q9BXT8 1623 aaKnown RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 VWA5AO00534 786 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 RBP3P10745 1247 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 DDI2Q5TDH0 399 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 NOA1Q8NC60 698 aaKnown RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 TFB1MQ8WVM0 346 aaKnown RBP21.72■■□□□ 1.07
KDM3B-201ENST00000314358 UVRAGQ9P2Y5 699 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 SLC25A13Q9UJS0 675 aa21.72■■□□□ 1.07
KDM3B-201ENST00000314358 TGM2P21980 687 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms