RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MAP2K5Q13163 448 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 MTM1Q13496 603 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 CDO1Q16878 200 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 ARFGAP1Q8N6T3 406 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 ASB7Q9H672 318 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 PIN4Q9Y237 131 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 A6NNZ2 444 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 CAND2O75155 1236 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 ATP2C2O75185 946 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 FSBPO95073 299 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 MFSD10Q14728 455 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 TUBB8Q3ZCM7 444 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.31
RNF4-201ENST00000314289 PCDHGC3Q9UN70 934 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 ITGA8P53708 1063 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 FKBP1BP68106 108 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 C3orf20Q8ND61 904 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 ZIC5Q96T25 663 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 COL1A2P08123 1366 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 A6NJR5 290 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 MAGOHP61326 146 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 CD302Q8IX05 232 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 C7orf31Q8N865 590 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 GCOM2Q9BZD3 368 aaPredicted RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
RNF4-201ENST00000314289 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
RNF4-201ENST00000314289 MYADML2A6NDP7 307 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 RECQL4O94761 1208 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 F2P00734 622 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 RBP5P82980 135 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 MORN1Q5T089 497 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 FAM102AQ5T9C2 384 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 DENND2CQ68D51 928 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 C12orf50Q8NA57 414 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 EXD1Q8NHP7 514 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 HSPH1Q92598 858 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 ART4Q93070 314 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 MTRF1LQ9UGC7 380 aaKnown RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 PARP2Q9UGN5 583 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.326e-6■■■■■ 55.1
RNF4-201ENST00000314289 ZNF148Q9UQR1 794 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 E5RJQ4 531 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 MED7O43513 233 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 LRCH4O75427 683 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 IFNB1P01574 187 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 GSCP56915 257 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 C15orf59Q2T9L4 293 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 CCDC38Q502W7 563 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 SPATS2Q86XZ4 545 aaKnown RBP13.08□□□□□ -0.32
RNF4-201ENST00000314289 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
RNF4-201ENST00000314289 CTGFP29279 349 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 CDH5P33151 784 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 GPD2P43304 727 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 NRLP54845 237 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 DRG2P55039 364 aaKnown RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
RNF4-201ENST00000314289 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 SPOCD1Q6ZMY3 1216 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 RASAL3Q86YV0 1011 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ATL2Q8NHH9 583 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 TMEM121Q9BTD3 319 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 B3GNT5Q9BYG0 378 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms