RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 H0YCG3 227 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 DNM1LO00429 736 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 TRAPPC3O43617 180 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 CTSHP09668 335 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 LCP1P13796 627 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 CCDC130P13994 396 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 BRAFP15056 766 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 TBXAS1P24557 533 aaPredicted RBP13.78□□□□□ -0.2
RAB6A-201ENST00000310653 LMO2P25791 158 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 EFNA5P52803 228 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 HADHBP55084 474 aaKnown RBP13.78□□□□□ -0.2
RAB6A-201ENST00000310653 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
RAB6A-201ENST00000310653 MCL1Q07820 350 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
RAB6A-201ENST00000310653 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 PLVAPQ9BX97 442 aa13.78□□□□□ -0.2
RAB6A-201ENST00000310653 MTA2O94776 668 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.2
RAB6A-201ENST00000310653 FAM107AO95990 144 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 OSBPP22059 807 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 MIPP30301 263 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 PPP1R26Q5T8A7 1209 aaPredicted RBP13.77□□□□□ -0.2
RAB6A-201ENST00000310653 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 DNAJB3Q8WWF6 145 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 PEBP4Q96S96 227 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 OSBPL7Q9BZF2 842 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 NAALADL1Q9UQQ1 740 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 CEP83Q9Y592 693 aa13.77□□□□□ -0.2
RAB6A-201ENST00000310653 A0A087WUV0 522 aaPredicted RBP13.77□□□□□ -0.21
RAB6A-201ENST00000310653 TGFB3P10600 412 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 RARGP13631 454 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 KRT15P19012 456 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 ERFP50548 548 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 CA9Q16790 459 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 ADAM32Q8TC27 787 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 PTPN18Q99952 460 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.21
RAB6A-201ENST00000310653 SLCO1B3Q9NPD5 702 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 GINM1Q9NU53 330 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 TSPAN16Q9UKR8 245 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
RAB6A-201ENST00000310653 LTBP3Q9NS15 1303 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 CDH6P55285 790 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.21
RAB6A-201ENST00000310653 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 ZPBP2Q6X784 338 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 NPLOC4Q8TAT6 608 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 RUBCNQ92622 972 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.212e-10■■■■□ 22.1
RAB6A-201ENST00000310653 ZFP42Q96MM3 310 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 ADPGKQ9BRR6 497 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 IP6K2Q9UHH9 426 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 TRIM33Q9UPN9 1127 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 NME7Q9Y5B8 376 aa13.77□□□□□ -0.21
RAB6A-201ENST00000310653 EYSQ5T1H1 3165 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
RAB6A-201ENST00000310653 CLDN5O00501 218 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 LIASO43766 372 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 PDGFRAP16234 1089 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 MAGEA4P43358 317 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 PHF13Q86YI8 300 aaPredicted RBP13.76□□□□□ -0.21
RAB6A-201ENST00000310653 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 KIF2BQ8N4N8 673 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 FZD8Q9H461 694 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 EXOC1LA0A1B0GW35 172 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 RASA4BC9J798 803 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 ASAP2O43150 1006 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 RASA4O43374 803 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 HBP1O60381 514 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 FAM155BO75949 473 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 TTC4O95801 387 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
RAB6A-201ENST00000310653 FNBP1LQ5T0N5 605 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■■■□□ 16.4
RAB6A-201ENST00000310653 PTPRHQ9HD43 1115 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 CHMP2BQ9UQN3 213 aa13.76□□□□□ -0.21
RAB6A-201ENST00000310653 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.217e-6■■■■■ 33.7
RAB6A-201ENST00000310653 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
RAB6A-201ENST00000310653 FNTAP49354 379 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 IFRD2Q12894 506 aaPredicted RBP13.75□□□□□ -0.21
RAB6A-201ENST00000310653 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 TFDP1Q14186 410 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 GRIK4Q16099 956 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 RXFP2Q8WXD0 754 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 ABCF3Q9NUQ8 709 aa13.75□□□□□ -0.21
RAB6A-201ENST00000310653 DNAH14Q0VDD8 3507 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms