RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CD19P15391 556 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 NEK3P51956 506 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 NCKAP1LP55160 1127 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 DSG1Q02413 1049 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 CUL2Q13617 745 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 LRRC23Q53EV4 343 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-201ENST00000309017 FAM182AQ5T1J6 154 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
PTPN7-201ENST00000309017 CALN1Q9BXU9 219 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 CLUHO75153 1309 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 PMM2O15305 246 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 STAM2O75886 525 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 USP1O94782 785 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-201ENST00000309017 PSMA2P25787 234 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 GSTT1P30711 240 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 GTF2H1P32780 548 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-201ENST00000309017 FAAP100Q0VG06 881 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 TXNRD3NBQ6F5E7 133 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 FAM71DQ8N9W8 422 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 TRAPPC9Q96Q05 1148 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 ACSS3Q9H6R3 686 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 TLE6Q9H808 572 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 KANSL3Q9P2N6 904 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-201ENST00000309017 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 EPHB1P54762 984 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 DYNC1I2Q13409 638 aaKnown RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 PDCD2Q16342 344 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CMPK2Q5EBM0 449 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 OR52E8Q6IFG1 317 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 PHC3Q8NDX5 983 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 MFSD14AQ96MC6 490 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CENPKQ9BS16 269 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 AGO4Q9HCK5 861 aaKnown RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 TBC1D22BQ9NU19 505 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ASTN2O75129 1339 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CYP1A1P04798 512 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 INHBEP58166 350 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 MCL1Q07820 350 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 RASSF3Q86WH2 238 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 BANPQ8N9N5 519 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 FAM136AQ96C01 138 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CCDC124Q96CT7 223 aaKnown RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 PTCD3Q96EY7 689 aaKnown RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 MECRQ9BV79 373 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ASB3Q9Y575 518 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 hCG_1818297A0A087WSY0 165 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 TRIM49D1C9J1S8 452 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ZC3H11AO75152 810 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ELK3P41970 407 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 KBTBD12Q3ZCT8 623 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 PLEKHA7Q6IQ23 1121 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 RIPOR1Q6ZS17 1223 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 PODNQ7Z5L7 613 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 TMPRSS6Q8IU80 811 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 B4GALNT2Q8NHY0 566 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 GORASP1Q9BQQ3 440 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 IDI2Q9BXS1 227 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-201ENST00000309017 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 SLC9A2Q9UBY0 812 aa11.67□□□□□ -0.54
PTPN7-201ENST00000309017 A8MXQ7 604 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 MCF2LO15068 1137 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CALB1P05937 261 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ETS2P15036 469 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 BRD2P25440 801 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 YY1P25490 414 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 GDF10P55107 478 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 HADHQ16836 314 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 WDR72Q3MJ13 1102 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SEZ6Q53EL9 994 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CC2D2BQ6DHV5 1058 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CRLF3Q8IUI8 442 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 RBM15BQ8NDT2 890 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CPT1BQ92523 772 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 HSPH1Q92598 858 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 APOPT1Q96IL0 206 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 TIPINQ9BVW5 301 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms