RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 C20orf96Q9NUD7 363 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 RIC1Q4ADV7 1423 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CBX4O00257 560 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 AOC2O75106 756 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 PMPCBO75439 489 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 ITGA7Q13683 1181 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SLFN11Q7Z7L1 901 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CORO1BQ9BR76 489 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 EML4Q9HC35 981 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CPSF2Q9P2I0 782 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 KIAA1257Q9ULG3 409 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 ZNF263O14978 683 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CCDC149Q6ZUS6 474 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC5A5Q92911 643 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CERS4Q9HA82 394 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 C2orf81A6NN90 581 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SEC31AO94979 1220 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SGCGQ13326 291 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SKA1Q96BD8 255 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 MED4Q9NPJ6 270 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CD274Q9NZQ7 290 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 LIMA1Q9UHB6 759 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CICQ96RK0 1608 aaPredicted RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 YWHAQP27348 245 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 PLCL1Q15111 1095 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SPDYE7PQ495Y7 208 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 BLOC1S5Q8TDH9 187 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 RECQL4O94761 1208 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 FBXO21O94952 628 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 MMEP08473 750 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 TUFMP49411 452 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 KCNA10Q16322 511 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SARM1Q6SZW1 724 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 ZNF720Q7Z2F6 126 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 EDEM1Q92611 657 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 L3MBTL1Q9Y468 752 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CD52P31358 61 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 MAPK9P45984 424 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 RHBDL3P58872 404 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 ACAD10Q6JQN1 1059 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 UBXN6Q9BZV1 441 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 PKN3Q6P5Z2 889 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 LMNTD2Q8IXW0 634 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 DDX47Q9H0S4 455 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC39A10Q9ULF5 831 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 PLAAQ9Y263 795 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 TOMM70O94826 608 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SGPL1O95470 568 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CHRM3P20309 590 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 RGS4P49798 205 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SPARCL1Q14515 664 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 NOMO2Q5JPE7 1267 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 RD3Q7Z3Z2 195 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 CCDC33Q8N5R6 958 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 ZNF507Q8TCN5 953 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-201ENST00000307142 PMS2P54278 862 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 BST2Q10589 180 aaKnown RBP11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 TAF11Q15544 211 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 LPPQ93052 612 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 CISHQ9NSE2 258 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 NFASCO94856 1347 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 SUPT3HB4E1H0 165 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 SUPT3HO75486 399 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 CXCL14O95715 111 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 KCNA2P16389 499 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 MUM1Q2TAK8 710 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 KRT35Q92764 455 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 TSPAN17Q96FV3 270 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 OSGEPL1Q9H4B0 414 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 FGBP02675 491 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 GUCY2CP25092 1073 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 ADIGQ0VDE8 80 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 NCAPHQ15003 741 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 THOC1Q96FV9 657 aaKnown RBP11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms