RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HPS4Q9NQG7 708 aa21.05■□□□□ 0.96
CXCL3-201ENST00000296026 INTS13Q9NVM9 706 aa21.05■□□□□ 0.96
CXCL3-201ENST00000296026 UXTQ9UBK9 157 aaPredicted RBP21.05■□□□□ 0.96
CXCL3-201ENST00000296026 R3HCC1Q9Y3T6 440 aaKnown RBP21.05■□□□□ 0.96
CXCL3-201ENST00000296026 ZNF233A6NK53 670 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 PRR5-ARHGAP8B1AHC4 643 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 K7ELQ4 463 aaPredicted RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 GABRDO14764 452 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 SPTLC2O15270 562 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 NOL4O94818 638 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 SDHBP21912 280 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 PCSK1P29120 753 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 CNR2P34972 360 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 ARHGAP8P85298 464 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 SPEM2Q0P670 501 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 MYO1EQ12965 1108 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 SRSF5Q13243 272 aaKnown RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 E2F4Q16254 413 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 CFAP221Q4G0U5 840 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 CBWD2Q8IUF1 395 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 SPATA2LQ8IUW3 424 aaPredicted RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 OR5B17Q8NGF7 314 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 TRMT2BQ96GJ1 504 aaKnown RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 TFIP11Q9UBB9 837 aaKnown RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 ZNF638Q14966 1978 aaKnown RBP21.04■□□□□ 0.96
CXCL3-201ENST00000296026 PTPRJQ12913 1337 aa21.04■□□□□ 0.96
CXCL3-201ENST00000296026 OTOL1A6NHN0 477 aaPredicted RBP21.03■□□□□ 0.96
CXCL3-201ENST00000296026 TADA3O75528 432 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 TNNC2P02585 160 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 HOXC13P31276 330 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 SURF1Q15526 300 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 CC2D1AQ6P1N0 951 aaPredicted RBP21.03■□□□□ 0.96
CXCL3-201ENST00000296026 DPH6Q7L8W6 267 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 SCN4BQ8IWT1 228 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 RIN3Q8TB24 985 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 HPDLQ96IR7 371 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 MYRFLQ96LU7 910 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 TRIM9Q9C026 710 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 CUEDC2Q9H467 287 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 KBTBD4Q9NVX7 518 aa21.03■□□□□ 0.96
CXCL3-201ENST00000296026 CEP250Q9BV73 2442 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 PPP6R2O75170 966 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 ATP2C2O75185 946 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 RETP07949 1114 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 ARSAP15289 507 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 HOXD13P35453 343 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 ATXN1P54253 815 aaKnown RBP21.02■□□□□ 0.96
CXCL3-201ENST00000296026 ZNF268Q14587 947 aaPredicted RBP21.02■□□□□ 0.96
CXCL3-201ENST00000296026 DUOXA2Q1HG44 320 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 TMEM196Q5HYL7 178 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 DHX58Q96C10 678 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 CHFRQ96EP1 664 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 FUBP3Q96I24 572 aaKnown RBP eCLIP21.02■□□□□ 0.96
CXCL3-201ENST00000296026 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.96
CXCL3-201ENST00000296026 TRPC7Q9HCX4 862 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 HSPBP1Q9NZL4 362 aa21.02■□□□□ 0.96
CXCL3-201ENST00000296026 CDV3Q9UKY7 258 aaKnown RBP21.02■□□□□ 0.96
CXCL3-201ENST00000296026 TRDMT1O14717 391 aaKnown RBP21.01■□□□□ 0.95
CXCL3-201ENST00000296026 HOXA6P31267 233 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 ASIC1P78348 528 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 AMPD3Q01432 767 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 FAM160A1Q05DH4 1040 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 GRSF1Q12849 480 aaKnown RBP eCLIP21.01■□□□□ 0.95
CXCL3-201ENST00000296026 FSTL4Q6MZW2 842 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 PKN3Q6P5Z2 889 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 FAM171BQ6P995 826 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 LIMS2Q7Z4I7 341 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.01■□□□□ 0.95
CXCL3-201ENST00000296026 KBTBD7Q8WVZ9 684 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 CYP2S1Q96SQ9 504 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 SYT15Q9BQS2 421 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 KIAA1586Q9HCI6 787 aa21.01■□□□□ 0.95
CXCL3-201ENST00000296026 EIF3DO15371 548 aaKnown RBP eCLIP21■□□□□ 0.95
CXCL3-201ENST00000296026 USP17L7P0C7H9 530 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 LMO2P25791 158 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 MAGEA11P43364 429 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 PSMC1P62191 440 aaKnown RBP21■□□□□ 0.95
CXCL3-201ENST00000296026 AMPD2Q01433 879 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 MTF1Q14872 753 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 PDGFRLQ15198 375 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 C4orf50Q6ZRC1 276 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 EPM2AIP1Q7L775 607 aaPredicted RBP21■□□□□ 0.95
CXCL3-201ENST00000296026 WDR5BQ86VZ2 330 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 WDR49Q8IV35 697 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 TTC16Q8NEE8 873 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 ZNF507Q8TCN5 953 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 SLC22A12Q96S37 553 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 MAGEC2Q9UBF1 373 aaPredicted RBP21■□□□□ 0.95
CXCL3-201ENST00000296026 CDH9Q9ULB4 789 aa21■□□□□ 0.95
CXCL3-201ENST00000296026 DYNC1LI1Q9Y6G9 523 aaKnown RBP21■□□□□ 0.95
CXCL3-201ENST00000296026 TRAV19A0A0A6YYK7 116 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 CUTAO60888 179 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 LRP3O75074 770 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 CKMP06732 381 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 FAM26FQ5R3K3 315 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 SHC4Q6S5L8 630 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 CEP68Q76N32 757 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 FSIP1Q8NA03 581 aa20.99■□□□□ 0.95
CXCL3-201ENST00000296026 IQUBQ8NA54 791 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms