RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ITGAVP06756 1048 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 PLCB3Q01970 1234 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 GPS1Q13098 491 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 IFT88Q13099 833 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 SMTNL2Q2TAL5 461 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 UPF1Q92900 1129 aaKnown RBP eCLIP21.04■□□□□ 0.962e-7■■■■□ 19.5
CXCL16-201ENST00000293778 C9orf72Q96LT7 481 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 HEXIM2Q96MH2 286 aaKnown RBP21.04■□□□□ 0.96
CXCL16-201ENST00000293778 ACAP3Q96P50 834 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 SYT17Q9BSW7 474 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 ITGA11Q9UKX5 1188 aa21.04■□□□□ 0.96
CXCL16-201ENST00000293778 SNAI1O95863 264 aaPredicted RBP21.03■□□□□ 0.96
CXCL16-201ENST00000293778 ITGBL1O95965 494 aaPredicted RBP21.03■□□□□ 0.96
CXCL16-201ENST00000293778 VDRP11473 427 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 CETPP11597 493 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 ETS1P14921 441 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 IL1R2P27930 398 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 CNGA2Q16280 664 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 GKAP1Q5VSY0 366 aaPredicted RBP21.03■□□□□ 0.96
CXCL16-201ENST00000293778 KIAA0319LQ8IZA0 1049 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 CACNA2D3Q8IZS8 1091 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 ZNF317Q96PQ6 595 aaPredicted RBP21.03■□□□□ 0.96
CXCL16-201ENST00000293778 CTNNAL1Q9UBT7 734 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 TPX2Q9ULW0 747 aaKnown RBP21.03■□□□□ 0.96
CXCL16-201ENST00000293778 EFR3BQ9Y2G0 817 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 C2CD2Q9Y426 696 aa21.03■□□□□ 0.96
CXCL16-201ENST00000293778 BTBD19C9JJ37 291 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 HMGCRP04035 888 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 MAGEA4P43358 317 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 GABRB2P47870 512 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 RBP5P82980 135 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 GRIK4Q16099 956 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 KCNT1Q5JUK3 1230 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 RNF187Q5TA31 235 aaPredicted RBP21.02■□□□□ 0.96
CXCL16-201ENST00000293778 PRMT1Q99873 361 aaKnown RBP21.02■□□□□ 0.96
CXCL16-201ENST00000293778 CCDC77Q9BR77 488 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 ADPGKQ9BRR6 497 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 ZNF408Q9H9D4 720 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 DPP3Q9NY33 737 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 SLC45A1Q9Y2W3 748 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 A0A1B0GUA9 196 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 GPD2P43304 727 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 DYNLT1P63172 113 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 DPH6Q7L8W6 267 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 MICALL1Q8N3F8 863 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 SLC35B2Q8TB61 432 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 MCRS1Q96EZ8 462 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 CABS1Q96KC9 395 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 TMEM121Q9BTD3 319 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 CCDC134Q9H6E4 229 aa21.02■□□□□ 0.96
CXCL16-201ENST00000293778 BARX2Q9UMQ3 279 aaPredicted RBP21.02■□□□□ 0.96
CXCL16-201ENST00000293778 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 SGK1O00141 431 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 KDELR1P24390 212 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 STAT4Q14765 748 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 CCL15Q16663 113 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 MARCH8Q5T0T0 291 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 DPP9Q86TI2 863 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 MS4A4AQ96JQ5 239 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 PCDH9Q9HC56 1237 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 SAYSD1Q9NPB0 183 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 MORF4L1Q9UBU8 362 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 GCLCP48506 637 aaPredicted RBP21.01■□□□□ 0.95
CXCL16-201ENST00000293778 NDST1P52848 882 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 INCA1Q0VD86 236 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 MKRN3Q13064 507 aaKnown RBP21.01■□□□□ 0.95
CXCL16-201ENST00000293778 MAP1SQ66K74 1059 aaPredicted RBP21.01■□□□□ 0.95
CXCL16-201ENST00000293778 CYP4F22Q6NT55 531 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 BBS12Q6ZW61 710 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 NT5DC4Q86YG4 428 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 UBA3Q8TBC4 463 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 PCSK1NQ9UHG2 260 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 LGALS13Q9UHV8 139 aa21.01■□□□□ 0.95
CXCL16-201ENST00000293778 CST8O60676 142 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 STAU1O95793 577 aaKnown RBP21■□□□□ 0.95
CXCL16-201ENST00000293778 IFNB1P01574 187 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 ABHD2P08910 425 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 PECAM1P16284 738 aaPredicted RBP21■□□□□ 0.95
CXCL16-201ENST00000293778 SMPD1P17405 629 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 OTUD4Q01804 1114 aaKnown RBP21■□□□□ 0.95
CXCL16-201ENST00000293778 MORF4L2Q15014 288 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 ZNF410Q86VK4 478 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 TTC13Q8NBP0 860 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 ACTL9Q8TC94 416 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 KIF12Q96FN5 646 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 FRMD8P1Q9BZ68 369 aaPredicted RBP21■□□□□ 0.95
CXCL16-201ENST00000293778 TMEM120BA0PK00 339 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 NDC80O14777 642 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 CDH16O75309 829 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 RNF8O76064 485 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 CPP00450 1065 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 MMP3P08254 477 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 GRM5P41594 1212 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 PSMC4P43686 418 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 IFNAR2P48551 515 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 GTF2A2P52657 109 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 MYO1EQ12965 1108 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 TAZQ16635 292 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 DUSP28Q4G0W2 176 aa21■□□□□ 0.95
CXCL16-201ENST00000293778 FAM102AQ5T9C2 384 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms