RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CASP4P49662 377 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 OAZ1P54368 228 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MTFR1Q15390 333 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SMTNL2Q2TAL5 461 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 EPC2Q52LR7 807 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 USP13Q92995 863 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 OTUB1Q96FW1 271 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 DCDC2Q9UHG0 476 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 CAPN6Q9Y6Q1 641 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MAP3K10Q02779 954 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SHCBP1Q8NEM2 672 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ATP8B4Q8TF62 1192 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MTIF3Q9H2K0 278 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 PKD2L2Q9NZM6 624 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 GPR182O15218 404 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 CYP2B6P20813 491 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 TMED1Q13445 227 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 CLEC16AQ2KHT3 1053 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ANKS3Q6ZW76 656 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SZRD1Q7Z422 152 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 FAR2Q96K12 515 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 PXDNQ92626 1479 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 AKAP3O75969 853 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 TGFB3P10600 412 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 RALBP11234 206 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 HARS2P49590 506 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 AASDHQ4L235 1098 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 VIL1P09327 827 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ILF2Q12905 390 aaKnown RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MED21Q13503 144 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 KRT72Q14CN4 511 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SYTL3Q4VX76 610 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 THEMIS2Q5TEJ8 643 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 AGR3Q8TD06 166 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 SYTL5Q8TDW5 730 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ABTB1Q969K4 478 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-201ENST00000292478 PDCD2LQ9BRP1 358 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 KCNQ5Q9NR82 932 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 C16orf96A6NNT2 1141 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 RGS2P41220 211 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 BCAT1P54687 386 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CNGA3Q16281 694 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 KBTBD12Q3ZCT8 623 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
PTCD1-201ENST00000292478 UGT3A1Q6NUS8 523 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 LRRC6Q86X45 466 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TNIP2Q8NFZ5 429 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CCDC126Q96EE4 140 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
PTCD1-201ENST00000292478 MUC3BQ9H195 1237 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 BCL9O00512 1426 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 HOXC6P09630 235 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 SHMT1P34896 483 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TMEM62Q0P6H9 643 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 FAM83EQ2M2I3 478 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 KIAA1683Q9H0B3 1180 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CCDC134Q9H6E4 229 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 COG4Q9H9E3 785 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 SLC24A2Q9UI40 661 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 DSEQ9UL01 958 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CFAP99D6REC4 459 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
PTCD1-201ENST00000292478 KDELC2Q7Z4H8 507 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 WDCPQ9H6R7 721 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 HNRNPCL2B2RXH8 293 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TRIM49D1C9J1S8 452 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 TOMM70O94826 608 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
PTCD1-201ENST00000292478 YAF2Q8IY57 180 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF555Q8NEP9 628 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
PTCD1-201ENST00000292478 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 300.9 ms