RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 USTQ9Y2C2 406 aa28.64■■■□□ 2.18
SSU72-201ENST00000291386 LRRC10BA6NIK2 292 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 ATF6P18850 670 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 EPHA5P54756 1037 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 RPL10AP62906 217 aaKnown RBP28.63■■■□□ 2.17
SSU72-201ENST00000291386 ZP2Q05996 745 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 IQCB1Q15051 598 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 EXOC3L4Q17RC7 722 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 IQCEQ6IPM2 695 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 TRIM65Q6PJ69 517 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 ADAMTS19Q8TE59 1207 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 PSMG2Q969U7 264 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 CEP295NLQ96MC4 621 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 LPIN3Q9BQK8 851 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 B3GNT5Q9BYG0 378 aa28.63■■■□□ 2.17
SSU72-201ENST00000291386 C19orf67A6NJJ6 358 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 LOC730098B7Z3J9 87 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 SOAT2O75908 522 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 CYP27A1Q02318 531 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 SMYD5Q6GMV2 418 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 PHLDB3Q6NSJ2 640 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 ITIH5Q86UX2 942 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 LEMD2Q8NC56 503 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 JAKMIP2Q96AA8 810 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 FAM81BQ96LP2 452 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 CRACR2AQ9BSW2 395 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 ELOVL4Q9GZR5 314 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 HCFC1R1Q9NWW0 138 aa28.62■■■□□ 2.17
SSU72-201ENST00000291386 RHOP08100 348 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 SLC9A1P19634 815 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 PON1P27169 355 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 CDR1P51861 262 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 PABPC1LQ4VXU2 614 aaKnown RBP28.61■■■□□ 2.17
SSU72-201ENST00000291386 ARHGEF19Q8IW93 802 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 PPM1KQ8N3J5 372 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 ANKRD20A12PQ8NF67 263 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 LRRC3Q9BY71 257 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 TAB2Q9NYJ8 693 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 NR2E1Q9Y466 385 aa28.61■■■□□ 2.17
SSU72-201ENST00000291386 MICAL2O94851 1124 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 TPM2P07951 284 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 ACO1P21399 889 aaKnown RBP28.6■■■□□ 2.17
SSU72-201ENST00000291386 BDNFP23560 247 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 NTHL1P78549 312 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 VEPH1Q14D04 833 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 PAQR9Q6ZVX9 377 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 DNAJB7Q7Z6W7 309 aaPredicted RBP28.6■■■□□ 2.17
SSU72-201ENST00000291386 TMEM176AQ96HP8 235 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 ATP8B3O60423 1300 aa28.6■■■□□ 2.17
SSU72-201ENST00000291386 FSHRP23945 695 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 RAD23BP54727 409 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 ORC1Q13415 861 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 PRSS36Q5K4E3 855 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 ENOSF1Q7L5Y1 443 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 OTOP3Q7RTS5 596 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 FUKQ8N0W3 1084 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 SLC4A11Q8NBS3 891 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 KAT5Q92993 513 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 SPATA17Q96L03 361 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 C8orf48Q96LL4 319 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 HNRNPABQ99729 332 aaKnown RBP28.59■■■□□ 2.17
SSU72-201ENST00000291386 CORO1BQ9BR76 489 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 ZNF518BQ9C0D4 1074 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 ASAH2Q9NR71 780 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.59■■■□□ 2.172e-10■□□□□ 9.6
SSU72-201ENST00000291386 APEX2Q9UBZ4 518 aa28.59■■■□□ 2.17
SSU72-201ENST00000291386 ZNF197O14709 1029 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 TRIM66O15016 1216 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 CDK11BP21127 795 aaKnown RBP28.58■■■□□ 2.17
SSU72-201ENST00000291386 GPR15P49685 360 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 COPB1P53618 953 aaKnown RBP28.58■■■□□ 2.17
SSU72-201ENST00000291386 DDR2Q16832 855 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 CYP4A22Q5TCH4 519 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 DPY19L2P1Q6NXN4 242 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 RRAGAQ7L523 313 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 APTXQ7Z2E3 356 aaKnown RBP28.58■■■□□ 2.17
SSU72-201ENST00000291386 FAM35AQ86V20 835 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 TMC8Q8IU68 726 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 C12orf29Q8N999 325 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 KREMEN1Q96MU8 473 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 UHRF1Q96T88 793 aaPredicted RBP28.58■■■□□ 2.17
SSU72-201ENST00000291386 VPS16Q9H269 839 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 SIX2Q9NPC8 291 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 CNTN6Q9UQ52 1028 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 DOCK8Q8NF50 2099 aa28.58■■■□□ 2.17
SSU72-201ENST00000291386 GREB1Q4ZG55 1949 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 BECN2A8MW95 431 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 CSH1P0DML2 217 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 CSH2P0DML3 217 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 GRIK1P39086 918 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 KCNMA1Q12791 1236 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 ZNF394Q53GI3 561 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 PDZD4Q76G19 769 aaPredicted RBP28.57■■■□□ 2.16
SSU72-201ENST00000291386 HS6ST3Q8IZP7 471 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 FAM200AQ8TCP9 573 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 SLC2A14Q8TDB8 520 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 ACSF2Q96CM8 615 aaPredicted RBP28.57■■■□□ 2.16
SSU72-201ENST00000291386 SMARCD1Q96GM5 515 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 RPGRIP1Q96KN7 1286 aa28.57■■■□□ 2.16
SSU72-201ENST00000291386 CBX8Q9HC52 389 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms