RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ACAD10Q6JQN1 1059 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 TMEM8AQ9HCN3 771 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 ATP6V1B1P15313 513 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 XKR3Q5GH77 459 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 MTDHQ86UE4 582 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 TMA16Q96EY4 203 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 ZNF560Q96MR9 790 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PCMTD2Q9NV79 361 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 AIM2O14862 343 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 SNX3O60493 162 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 RASSF9O75901 435 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 C4BPBP20851 252 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC12A1Q13621 1099 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 EZH2Q15910 746 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 FASTKD1Q53R41 847 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 TWF2Q6IBS0 349 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 FBXO25Q8TCJ0 367 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 DLG3Q92796 817 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PARK7Q99497 189 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 TFR2Q9UP52 801 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PRKAA2P54646 552 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 MDH1BQ5I0G3 518 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 CLEC4FQ8N1N0 589 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PPP1R14BQ96C90 147 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PPP1R16BQ96T49 567 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 NAT9Q9BTE0 207 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 FSD1LQ9BXM9 530 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 DGAT1O75907 488 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 SEC24DO94855 1032 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 ITGA9Q13797 1035 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 CATSPER3Q86XQ3 398 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 TUBGCP3Q96CW5 907 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 COPG2Q9UBF2 871 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 APPL1Q9UKG1 709 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 COG4Q9H9E3 785 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 ATXN10Q9UBB4 475 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 SOX13Q9UN79 622 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 USP1O94782 785 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 PEX5P50542 639 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 HMGCS2P54868 508 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 EFHC2Q5JST6 749 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 NET1Q7Z628 596 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 WDR60Q8WVS4 1066 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 CCDC126Q96EE4 140 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 TLR10Q9BXR5 811 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 ILKAPQ9H0C8 392 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 SHOC2Q9UQ13 582 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 PSMG1O95456 288 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 PLEKP08567 350 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 NUDT17P0C025 328 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 LPCAT2Q7L5N7 544 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 AGAP11Q8TF27 550 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 CKAP2Q8WWK9 683 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 CNGB3Q9NQW8 809 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 PCDHGC5Q9Y5F6 944 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 DRG2P55039 364 aaKnown RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 CHST13Q8NET6 341 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 NMD3Q96D46 503 aaKnown RBP18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 RMDN1Q96DB5 314 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 RIT2Q99578 217 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 TMEM117Q9H0C3 514 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 DIABLOQ9NR28 239 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 TMCO1Q9UM00 188 aa18.22■□□□□ 0.51
PCDHA13-201ENST00000289272 KLHL41O60662 606 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 ZC2HC1CQ53FD0 456 aaPredicted RBP18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 MOXD1Q6UVY6 613 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 GIMAP4Q9NUV9 329 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 KCNH4Q9UQ05 1017 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 MROH7Q68CQ1 1323 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 CBFA2T3O75081 653 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 CYP11B2P19099 503 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 GTF2H1P32780 548 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 OASLQ15646 514 aaKnown RBP18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 FAM205AQ6ZU69 1335 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 POLBP06746 335 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 PON1P27169 355 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 GSTT1P30711 240 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 MTMR2Q13614 643 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 MXD4Q14582 209 aaPredicted RBP18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 RDM1Q8NG50 284 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 SCFD1Q8WVM8 642 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 MST1RQ04912 1400 aa18.21■□□□□ 0.51
PCDHA13-201ENST00000289272 KCNN4O15554 427 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 MTSS1O43312 755 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 FDFT1P37268 417 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 SLC15A2Q16348 729 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 TMTC4Q5T4D3 741 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 PPHLN1Q8NEY8 458 aaKnown RBP18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 FEZF2Q8TBJ5 459 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 C18orf8Q96DM3 657 aa18.21■□□□□ 0.5
PCDHA13-201ENST00000289272 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms