RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KIF19Q2TAC6 998 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 CCT7Q99832 543 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SIKE1Q9BRV8 207 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 GGA3Q9NZ52 723 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 WNT10BO00744 389 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 CYP3A4P08684 503 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 MSL3Q8N5Y2 521 aaKnown RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 TSSK1BQ9BXA7 367 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 PROSCO94903 275 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT8P05787 483 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 LCP1P13796 627 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 ACADSP16219 412 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 SEMA4DQ92854 862 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 ABCF3Q9NUQ8 709 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 DUOX1Q9NRD9 1551 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 OPLAHO14841 1288 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 OATP04181 439 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 PGK2P07205 417 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 CLCN3P51790 818 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 THEMIS2Q5TEJ8 643 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 ARHGAP22Q7Z5H3 698 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 EXT2Q93063 718 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 MLH1P40692 756 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
SLC6A1-201ENST00000287766 RPS6KA5O75582 802 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 TCN1P20061 433 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CNTN2Q02246 1040 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 AMHR2Q16671 573 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CLMNQ96JQ2 1002 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 PSMC3IPQ9P2W1 217 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ARHGEF9O43307 516 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CHKAP35790 457 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 PHKA2P46019 1235 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CDH8P55286 799 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 MARSP56192 900 aaKnown RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 FMO1Q01740 532 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 NME3Q13232 169 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 FAM167AQ96KS9 214 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 DNPEPQ9ULA0 475 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 C15orf41Q9Y2V0 281 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 A8MXQ7 604 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 F8VP50 259 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CES2O00748 559 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 DUPD1Q68J44 220 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ACAD11Q709F0 780 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 MREGQ8N565 214 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ACTL9Q8TC94 416 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 TRAPPC12Q8WVT3 735 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 DCLK3Q9C098 648 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 APOA1P02647 267 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 ITGB3P05106 788 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 SSTR1P30872 391 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 KCTD21Q4G0X4 260 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 KREMEN1Q96MU8 473 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 RNF19AQ9NV58 838 aa13.09□□□□□ -0.31
SLC6A1-201ENST00000287766 GTSE1Q9NYZ3 720 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms