RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DCAF4L1Q3SXM0 396 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 XYLT1Q86Y38 959 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 KATNAL2Q8IYT4 538 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 MTRF1LQ9UGC7 380 aaKnown RBP18.92■□□□□ 0.62
CAPN1-201ENST00000279247 TCRBV5S1A1TA0A578 114 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 BHMG1C9JSJ3 638 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-201ENST00000279247 TOMM70O94826 608 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 PAEPP09466 180 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 IL1R2P27930 398 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 FNTAP49354 379 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 GNGT1P63211 74 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 CCDC142Q17RM4 750 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 GLIS1Q8NBF1 620 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 SNX27Q96L92 541 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ZFP42Q96MM3 310 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 APBA2Q99767 749 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 DNPEPQ9ULA0 475 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 SMIM35A0A1B0GVV1 85 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 MEIS3P2A8K0S8 358 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 ACSL3O95573 720 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 CD48P09326 243 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 ADORA2BP29275 332 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 CETN2P41208 172 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 SLC29A2Q14542 456 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 C15orf59Q2T9L4 293 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-201ENST00000279247 FOXR1Q6PIV2 292 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 EXD1Q8NHP7 514 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 CAPNS2Q96L46 248 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 STRIP2Q9ULQ0 834 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 A8MXQ7 604 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 GAS8O95995 478 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 GPD2P43304 727 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 GUCY1A3Q02108 690 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 SREBF2Q12772 1141 aa18.91■□□□□ 0.62
CAPN1-201ENST00000279247 HP1BP3Q5SSJ5 553 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-201ENST00000279247 NOVA2Q9UNW9 492 aaKnown RBP18.91■□□□□ 0.62
CAPN1-201ENST00000279247 MBLAC1A4D2B0 266 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 H0YGN5 161 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 LRCH4O75427 683 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 VDRP11473 427 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 IGFBP6P24592 240 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 CHKAP35790 457 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 MTM1Q13496 603 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SCYL2Q6P3W7 929 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ARFGAP1Q8N6T3 406 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 TRPV1Q8NER1 839 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 BEST2Q8NFU1 509 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 CALN1Q9BXU9 219 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 B3GNT5Q9BYG0 378 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 NME7Q9Y5B8 376 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 NFS1Q9Y697 457 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ITGA8P53708 1063 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 MTMR3Q13615 1198 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 PIGHQ14442 188 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ZSCAN26Q16670 478 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 DEFB115Q30KQ5 88 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 DENND2CQ68D51 928 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SPOCD1Q6ZMY3 1216 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SCUBE3Q8IX30 993 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 RNF169Q8NCN4 708 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ATP6V1G3Q96LB4 118 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 CAPS2Q9BXY5 557 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 CYP3A43Q9HB55 503 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SMIM28A0A1B0GU29 152 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 RARBP10826 455 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ATF2P15336 505 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ELNP15502 786 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 NR1D1P20393 614 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 LMO2P25791 158 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 CDH5P33151 784 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 FLT3LGP49771 235 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SOX4Q06945 474 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 KLF1Q13351 362 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 PPP1R15BQ5SWA1 713 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 PPP1R2P3Q6NXS1 205 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 ATL2Q8NHH9 583 aa18.9■□□□□ 0.62
CAPN1-201ENST00000279247 IPO4Q8TEX9 1081 aaKnown RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
CAPN1-201ENST00000279247 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 CA12O43570 354 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 CCDC130P13994 396 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 PURAQ00577 322 aaKnown RBP18.89■□□□□ 0.61
CAPN1-201ENST00000279247 PRKCZQ05513 592 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 KYAT1Q16773 422 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 EIF1ADQ8N9N8 165 aaKnown RBP18.89■□□□□ 0.61
CAPN1-201ENST00000279247 ARRDC4Q8NCT1 418 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 LHX5Q9H2C1 402 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 PPFIA2O75334 1257 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 HNRNPH2P55795 449 aaKnown RBP18.89■□□□□ 0.61
CAPN1-201ENST00000279247 CNGA2Q16280 664 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 PMF1Q6P1K2 205 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 FAM183BPQ6ZVS7 135 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 RCOR2Q8IZ40 523 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 RBM41Q96IZ5 413 aaKnown RBP18.89■□□□□ 0.61
CAPN1-201ENST00000279247 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
CAPN1-201ENST00000279247 FAM107BQ9H098 131 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms