RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 SERPINB12Q96P63 405 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ZNF317Q96PQ6 595 aaPredicted RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 FDXACB1Q9BRP7 624 aaPredicted RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 FOXP3Q9BZS1 431 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 NSRP1Q9H0G5 558 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 SEMA4AQ9H3S1 761 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 AGO3Q9H9G7 860 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ARHGAP28Q9P2N2 729 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 PSTPIP1O43586 416 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 TCEA3O75764 348 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 KRT5P13647 590 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CHN1P15882 459 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CD52P31358 61 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CRYBB1P53674 252 aaPredicted RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 FBXO47Q5MNV8 452 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 LIN9Q5TKA1 542 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 RHBDF2Q6PJF5 856 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CCDC50Q8IVM0 306 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CCDC13Q8IYE1 715 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 EXOC8Q8IYI6 725 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 RNF149Q8NC42 400 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ATXN2LQ8WWM7 1075 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ADAM7Q9H2U9 754 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 MINDY3Q9H8M7 445 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 MRPL47Q9HD33 250 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 INTS9Q9NV88 658 aaKnown RBP9.23□□□□□ -0.93
TRIM43-201ENST00000272395 ANAPC7Q9UJX3 599 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 STYXL1Q9Y6J8 313 aa9.23□□□□□ -0.93
TRIM43-201ENST00000272395 TRIP12Q14669 1992 aaPredicted RBP9.22□□□□□ -0.93
TRIM43-201ENST00000272395 TCRBV7S2A1N4TA0A589 114 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 TLDC2A0PJX2 215 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 LRRIQ4A6NIV6 560 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 CLDN3O15551 220 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 PIGRP01833 764 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 CYP1A1P04798 512 aaPredicted RBP9.22□□□□□ -0.93
TRIM43-201ENST00000272395 GSTA1P08263 222 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 DARSP14868 501 aaKnown RBP9.22□□□□□ -0.93
TRIM43-201ENST00000272395 NSFP46459 744 aaKnown RBP9.22□□□□□ -0.93
TRIM43-201ENST00000272395 KRT17Q04695 432 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 PPIGQ13427 754 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM43-201ENST00000272395 QPCTQ16769 361 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 ZACNQ401N2 412 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 SLFN12LQ6IEE8 588 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 TSHZ1Q6ZSZ6 1077 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 PIGWQ7Z7B1 504 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 RELL1Q8IUW5 271 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 ATL2Q8NHH9 583 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 IL23AQ9NPF7 189 aa9.22□□□□□ -0.93
TRIM43-201ENST00000272395 ADGRA3Q8IWK6 1321 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 NDC80O14777 642 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 PROSCO94903 275 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CXCL10P02778 98 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 RPLP2P05387 115 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 DLATP10515 647 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 EIF4BP23588 611 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 RFC2P35250 354 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CETN2P41208 172 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 LIG4P49917 911 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 LMNB2Q03252 620 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 STRN3Q13033 797 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 AUHQ13825 339 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CCNG2Q16589 344 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 C9orf50Q5SZB4 431 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 FBXW10Q5XX13 1052 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 ZNF365Q70YC5 407 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 OTOP2Q7RTS6 562 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 PHF13Q86YI8 300 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 RHOT1Q8IXI2 618 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 KATNAL2Q8IYT4 538 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 DEPTORQ8TB45 409 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CCT6BQ92526 530 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 BICD1Q96G01 975 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 BTBD6Q96KE9 485 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CCDC114Q96M63 670 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 FNBP1Q96RU3 617 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 POP1Q99575 1024 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 GDF15Q99988 308 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 SELENOSQ9BQE4 189 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 FAM213AQ9BRX8 229 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 TRAIPQ9BWF2 469 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 GCOM2Q9BZD3 368 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 DCLK3Q9C098 648 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 UBE2OQ9C0C9 1292 aaKnown RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 ACP6Q9NPH0 428 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms