RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SPTLC1O15269 473 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 XPOTO43592 962 aaKnown RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 OPA1O60313 960 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 GBP1P32455 592 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 PTPN7P35236 360 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 SLC25A11Q02978 314 aaKnown RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 GOLGA7BQ2TAP0 167 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 PPP1R26Q5T8A7 1209 aaPredicted RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 TWF2Q6IBS0 349 aaKnown RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 POLNQ7Z5Q5 900 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 ACOT1Q86TX2 421 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 KBTBD7Q8WVZ9 684 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 HOMER3Q9NSC5 361 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 PPFIA2O75334 1257 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 LRCH4O75427 683 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 CHRNA1P02708 482 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 KRT1P04264 644 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 SNX1Q13596 522 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 CCNG2Q16589 344 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 MFSD7Q6UXD7 560 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 RPAINQ86UA6 219 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 SESTD1Q86VW0 696 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 TTC30AQ86WT1 665 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 EMC1Q8N766 993 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 FBXO25Q8TCJ0 367 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 ZNF560Q96MR9 790 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 SENP6Q9GZR1 1112 aaPredicted RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 XPNPEP3Q9NQH7 507 aa17.53■□□□□ 0.4
CCDC40-201ENST00000269318 DDX56Q9NY93 547 aaKnown RBP17.53■□□□□ 0.4
CCDC40-201ENST00000269318 KPNA7A9QM74 516 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 GOLGA8KD6RF30 607 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 H0YGN5 161 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 M0QZ92 97 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 PTGESO14684 152 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
CCDC40-201ENST00000269318 PNPLA4P41247 253 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 PLTPP55058 493 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 COPS2P61201 443 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 ADCY2Q08462 1091 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 MGAT3Q09327 533 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 NOGQ13253 232 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 ARHGAP17Q68EM7 881 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 CCSAPQ6IQ19 270 aaPredicted RBP17.52■□□□□ 0.4
CCDC40-201ENST00000269318 RSPH3Q86UC2 560 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.4
CCDC40-201ENST00000269318 RAPGEF5Q92565 580 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 FAM204AQ9H8W3 233 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 GOLGA2P5Q9HBQ8 144 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 NFS1Q9Y697 457 aa17.52■□□□□ 0.4
CCDC40-201ENST00000269318 E5RJQ4 531 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 KRT14P02533 472 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 FGFR1P11362 822 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 IL1R2P27930 398 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 KRT17Q04695 432 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 DHX9Q08211 1270 aaKnown RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 LRIG3Q6UXM1 1119 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SPOCD1Q6ZMY3 1216 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SYDE1Q6ZW31 735 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 OR6B3Q8NGW1 331 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 ARL8AQ96BM9 186 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 PPP1R10Q96QC0 940 aaKnown RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 DPEP3Q9H4B8 488 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 PLAAQ9Y263 795 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 NEU2Q9Y3R4 380 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 C3orf70A6NLC5 250 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 TULP2O00295 520 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 HCRTO43612 131 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 AOC2O75106 756 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 RPS6KA5O75582 802 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 ASGR1P07306 291 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SETSIPP0DME0 302 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 KRT10P13645 584 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 LRPAP1P30533 357 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 CETN2P41208 172 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 TAF6P49848 677 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 PTK6Q13882 451 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 TTMPQ5BVD1 217 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SPDYCQ5MJ68 293 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 FAM102AQ5T9C2 384 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 PMF1Q6P1K2 205 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 FAM183BPQ6ZVS7 135 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 CRYBG2Q8N1P7 616 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 ATL2Q8NHH9 583 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 GRK7Q8WTQ7 553 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SLC35F5Q8WV83 523 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 ART4Q93070 314 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-201ENST00000269318 SLC4A5Q9BY07 1137 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 MIS12Q9H081 205 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 FAM49BQ9NUQ9 324 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms