RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SDCCAG3Q96C92 435 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 DCUN1D1Q96GG9 259 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 ADAM2Q99965 735 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 NRCAMQ92823 1304 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 USP2O75604 605 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 GLRA2P23416 452 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 CDH8P55286 799 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 ELAVL2Q12926 359 aaKnown RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 SH3BP5LQ7L8J4 393 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 REXO1L1PQ8IX06 675 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 ATP6V1G3Q96LB4 118 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 CAPN6Q9Y6Q1 641 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 CASP5P51878 434 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 PBXIP1Q96AQ6 731 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 LACRTQ9GZZ8 138 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 ADAM21Q9UKJ8 722 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 SPATA31C2B4DYI2 1134 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 NUMBP49757 651 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 TKTL1P51854 596 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 CENPCQ03188 943 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 BST2Q10589 180 aaKnown RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 APBA2Q99767 749 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 TRPM5Q9NZQ8 1165 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 APOBEC2Q9Y235 224 aaKnown RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 GSTA4O15217 222 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 FOXP2O15409 715 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 F9P00740 461 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 IL1RL1Q01638 556 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ABRAQ8N0Z2 381 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ZNF606Q8WXB4 792 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 KRT35Q92764 455 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 GAD1Q99259 594 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 TXLNGQ9NUQ3 528 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 PCDHB12Q9Y5F1 795 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 SLC30A1Q9Y6M5 507 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 NFASCO94856 1347 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 HOXC6P09630 235 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 SMIM10L2AP0DMW4 78 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 SMIM10L2BP0DMW5 78 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 NOA1Q8NC60 698 aaKnown RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 DCTN4Q9UJW0 460 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 TSPAN16Q9UKR8 245 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 RIPK3Q9Y572 518 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 CASQ2O14958 399 aaPredicted RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 PLA2G6O60733 806 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 RECQL4O94761 1208 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 LSM8O95777 96 aaKnown RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 COILP38432 576 aaPredicted RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 ITGA8P53708 1063 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 FUT2Q10981 343 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ZNF177Q13360 481 aaPredicted RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 THEMIS2Q5TEJ8 643 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ALG13Q9NP73 1137 aaKnown RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 PDGFCQ9NRA1 345 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 EPS15L1Q9UBC2 864 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 EGFRP00533 1210 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 IL17AQ16552 155 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ERP44Q9BS26 406 aa14.31□□□□□ -0.12
NPC1-201ENST00000269228 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
NPC1-201ENST00000269228 MTSS1O43312 755 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 PPP1R11O60927 126 aaPredicted RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 AKT1P31749 480 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ARHGEF7Q14155 803 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 IMPG1Q17R60 797 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 CLEC16AQ2KHT3 1053 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 FAXCQ5TGI0 409 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 MTHFD1LQ6UB35 978 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ANGPTL8Q6UXH0 198 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 SLFN11Q7Z7L1 901 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 KIAA0319LQ8IZA0 1049 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ATG4AQ8WYN0 398 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ZBTB18Q99592 522 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 LMO7Q8WWI1 1683 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 SLC12A8A0AV02 714 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 FBXO21O94952 628 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 KYNUQ16719 465 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 BEND6Q5SZJ8 279 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms