RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 SERAC1Q96JX3 654 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 PSMC3IPQ9P2W1 217 aaPredicted RBP17.64■□□□□ 0.41
SQLE-201ENST00000265896 HMGXB4Q9UGU5 601 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 XPO7Q9UIA9 1087 aaKnown RBP17.64■□□□□ 0.41
SQLE-201ENST00000265896 E5RJQ4 531 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 CYB561D2O14569 222 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 TYROBPO43914 113 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 UGT1A9O60656 530 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 PSAPP07602 524 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 BPIFB4P59827 614 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 CXCL9Q07325 125 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 TFDP3Q5H9I0 405 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 ALYREFQ86V81 257 aaKnown RBP17.64■□□□□ 0.41
SQLE-201ENST00000265896 RCOR2Q8IZ40 523 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 SHKBP1Q8TBC3 707 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 UCMAQ8WVF2 138 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 CLPTM1LQ96KA5 538 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 NTPCRQ9BSD7 190 aaKnown RBP17.64■□□□□ 0.41
SQLE-201ENST00000265896 UGT1A7Q9HAW7 530 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 UGT1A10Q9HAW8 530 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 UGT1A8Q9HAW9 530 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 STARD13Q9Y3M8 1113 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 WDR46O15213 610 aaKnown RBP17.63■□□□□ 0.41
SQLE-201ENST00000265896 PYGBP11216 843 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 CCND2P30279 289 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 FAAP100Q0VG06 881 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 KPNB1Q14974 876 aaKnown RBP17.63■□□□□ 0.41
SQLE-201ENST00000265896 CCDC6Q16204 474 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 QSER1Q2KHR3 1735 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 PTPN20Q4JDL3 420 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 PRPF39Q86UA1 669 aaKnown RBP17.63■□□□□ 0.41
SQLE-201ENST00000265896 IMPG2Q9BZV3 1241 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 RNPEPL1Q9HAU8 725 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 TPBGLP0DKB5 382 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 GARTP22102 1010 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 GMPRP36959 345 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 ELK3P41970 407 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 GEMIN4P57678 1058 aaKnown RBP17.63■□□□□ 0.41
SQLE-201ENST00000265896 OASLQ15646 514 aaKnown RBP17.63■□□□□ 0.41
SQLE-201ENST00000265896 KBTBD12Q3ZCT8 623 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 CDHR3Q6ZTQ4 885 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 CLNKQ7Z7G1 428 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 UBA3Q8TBC4 463 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 TRIM11Q96F44 468 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 SHCBP1LQ9BZQ2 653 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 R3HDMLQ9H3Y0 253 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 SCINQ9Y6U3 715 aa17.63■□□□□ 0.41
SQLE-201ENST00000265896 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 PSMC1P62191 440 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 GNPTABQ3T906 1256 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 ENOSF1Q7L5Y1 443 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 KCTD6Q8NC69 237 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 BBOF1Q8ND07 529 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 WDR60Q8WVS4 1066 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 RBM41Q96IZ5 413 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 RAB3IPQ96QF0 476 aaPredicted RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 MAGEB5Q9BZ81 275 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 ZNRF3Q9ULT6 936 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 ATP2A1O14983 1001 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 TCEA3O75764 348 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 PSEN1P49768 467 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 MKRN3Q13064 507 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 ISLR2Q6UXK2 745 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 ZCCHC23Q6ZST2 131 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 PPM1NQ8N819 430 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 CCHCR1Q8TD31 782 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 PIWIL1Q96J94 861 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 CADM1Q9BY67 442 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 LRMDAQ9H2I8 198 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
SQLE-201ENST00000265896 MYH9P35579 1960 aaKnown RBP17.62■□□□□ 0.41
SQLE-201ENST00000265896 DPPA5A6NC42 116 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 ALOX15BO15296 676 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 PMM2O15305 246 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 B4GALT5O43286 388 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 LRCH4O75427 683 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 STAM2O75886 525 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 KRT3P12035 628 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 TRPC3Q13507 836 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 RCN1Q15293 331 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 THEMIS2Q5TEJ8 643 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 SCYL2Q6P3W7 929 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 PHF13Q86YI8 300 aaPredicted RBP17.61■□□□□ 0.41
SQLE-201ENST00000265896 SLC7A3Q8WY07 619 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 ACAP3Q96P50 834 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 GMLQ99445 158 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 GJA3Q9Y6H8 435 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 LPXNO60711 386 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 CALB2P22676 271 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 FKBP1AP62942 108 aaKnown RBP17.61■□□□□ 0.41
SQLE-201ENST00000265896 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 C15orf59Q2T9L4 293 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms