RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 GUCY1A3Q02108 690 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 INCA1Q0VD86 236 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 SREBF2Q12772 1141 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 CNGA2Q16280 664 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 SYDE1Q6ZW31 735 aaPredicted RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 NT5DC4Q86YG4 428 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 SNF8Q96H20 258 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 FEZ2Q9UHY8 353 aaPredicted RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 LCMT1Q9UIC8 334 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 NOVA2Q9UNW9 492 aaKnown RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 NEU2Q9Y3R4 380 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 SMIM35A0A1B0GVV1 85 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 DCDC2CA8MYV0 355 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 NUDT17P0C025 328 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 DARSP14868 501 aaKnown RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 ADCY8P40145 1251 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 EIF3BP55884 814 aaKnown RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 EMC10Q5UCC4 262 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 SNX27Q96L92 541 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 NXF3Q9H4D5 531 aaKnown RBP17.79■□□□□ 0.44
CHKA-201ENST00000265689 ZWILCHQ9H900 591 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 AAASQ9NRG9 546 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 ZNF236Q9UL36 1845 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
CHKA-201ENST00000265689 PIK3R2O00459 728 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 EIF3HO15372 352 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHKA-201ENST00000265689 PGK1P00558 417 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 MYL3P08590 195 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 ATF2P15336 505 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 ITIH2P19823 946 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 CHKAP35790 457 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 PSEN2P49810 448 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 ITGA8P53708 1063 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 SMTNL2Q2TAL5 461 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 ODF2Q5BJF6 829 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 AGBL2Q5U5Z8 902 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 C12orf29Q8N999 325 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 TMEM40Q8WWA1 233 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 APOL6Q9BWW8 343 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 TREHO43280 583 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 STAU1O95793 577 aaKnown RBP17.78■□□□□ 0.44
CHKA-201ENST00000265689 HMGCRP04035 888 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 RARGP13631 454 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 IL1R2P27930 398 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 ZNF268Q14587 947 aaPredicted RBP17.78■□□□□ 0.44
CHKA-201ENST00000265689 SLMAPQ14BN4 828 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 NOTUMQ6P988 496 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 HAUS1Q96CS2 278 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
CHKA-201ENST00000265689 PLEKHA5Q9HAU0 1116 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
CHKA-201ENST00000265689 DNPEPQ9ULA0 475 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
CHKA-201ENST00000265689 hCG_1818297A0A087WSY0 165 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 RIPK2O43353 540 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 CAND2O75155 1236 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 LRCH4O75427 683 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 TJP3O95049 919 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 AKAP5P24588 427 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 ADAM17P78536 824 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 SLC25A11Q02978 314 aaKnown RBP17.77■□□□□ 0.44
CHKA-201ENST00000265689 MYO1EQ12965 1108 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 KCNT1Q5JUK3 1230 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 ZNF365Q70YC5 407 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
CHKA-201ENST00000265689 PWWP2AQ96N64 755 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 NT5C1AQ9BXI3 368 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 FAM129AQ9BZQ8 928 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 RNF186Q9NXI6 227 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 DDX56Q9NY93 547 aaKnown RBP17.77■□□□□ 0.44
CHKA-201ENST00000265689 WDR35Q9P2L0 1181 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 SMIM23A6NLE4 172 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 LIASO43766 372 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 CDKN2BP42772 138 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 GABRB2P47870 512 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 YARSP54577 528 aaKnown RBP17.77■□□□□ 0.44
CHKA-201ENST00000265689 MAGOHP61326 146 aaKnown RBP17.77■□□□□ 0.44
CHKA-201ENST00000265689 CDC42EP1Q00587 391 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 TFDP3Q5H9I0 405 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 GSTA5Q7RTV2 222 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 ANAPC5Q9UJX4 755 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 TSPAN16Q9UKR8 245 aa17.77■□□□□ 0.44
CHKA-201ENST00000265689 TLDC2A0PJX2 215 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 C3orf70A6NLC5 250 aaPredicted RBP17.76■□□□□ 0.43
CHKA-201ENST00000265689 RECQL4O94761 1208 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 RGS2P41220 211 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 GSCP56915 257 aaPredicted RBP17.76■□□□□ 0.43
CHKA-201ENST00000265689 COPS2P61201 443 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 APBB1IPQ7Z5R6 666 aaPredicted RBP17.76■□□□□ 0.43
CHKA-201ENST00000265689 MCRS1Q96EZ8 462 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 APBA2Q99767 749 aa17.76■□□□□ 0.43
CHKA-201ENST00000265689 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
CHKA-201ENST00000265689 SCN1AP35498 2009 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms