RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 EEPD1Q7L9B9 569 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
SNX1-201ENST00000261889 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
SNX1-201ENST00000261889 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNX1-201ENST00000261889 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.64□□□□□ -0.23
SNX1-201ENST00000261889 GPATCH2LQ9NWQ4 482 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 TAS2R1Q9NYW7 299 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 B2RBV5 119 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 DNALI1O14645 258 aaPredicted RBP13.64□□□□□ -0.23
SNX1-201ENST00000261889 PDE5AO76074 875 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 ARL4CP56559 192 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 WDR44Q5JSH3 913 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 MON1BQ7L1V2 547 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 TREML1Q86YW5 311 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 JOSD2Q8TAC2 188 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 MANSC1Q9H8J5 431 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 RIPK3Q9Y572 518 aa13.64□□□□□ -0.23
SNX1-201ENST00000261889 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
SNX1-201ENST00000261889 MYOCOSA0A1B0GUC4 107 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 LPXNO60711 386 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 IL1R2P27930 398 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 HADHBP55084 474 aaKnown RBP13.63□□□□□ -0.23
SNX1-201ENST00000261889 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 FYB2Q5VWT5 728 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CES4AQ5XG92 561 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 C1orf228Q6PIY5 440 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 STMN2Q93045 179 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 SLITRK1Q96PX8 696 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 RMDN3Q96TC7 470 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 MAGEB5Q9BZ81 275 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 EURLQ9NYK6 297 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 STARD13Q9Y3M8 1113 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 PAPPA2Q9BXP8 1791 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
SNX1-201ENST00000261889 A6NHS1 94 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 VNN1O95497 513 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 PGGT1BP53609 377 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CDH8P55286 799 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CCNG2Q16589 344 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 Q3C1V9 767 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 SLC9A9Q8IVB4 645 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
SNX1-201ENST00000261889 GSC2O15499 205 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 TYROBPO43914 113 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 GJB1P08034 283 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CD1EP15812 388 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 ATP6V1C1P21283 382 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 NOMO3P69849 1222 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CRADDP78560 199 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 GTF2BQ00403 316 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 TSNAXIP1Q2TAA8 658 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 CFAP157Q5JU67 520 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 TAS1R3Q7RTX0 852 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 AGGF1Q8N302 714 aaeCLIP13.63□□□□□ -0.23
SNX1-201ENST00000261889 RILPQ96NA2 401 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 GMLQ99445 158 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 EBF4Q9BQW3 602 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 BATF3Q9NR55 127 aa13.63□□□□□ -0.23
SNX1-201ENST00000261889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNX1-201ENST00000261889 TXNDC9O14530 226 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 LYPLA1O75608 230 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 DCTN3O75935 186 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 PGM1P36871 562 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 ELK3P41970 407 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 CACNA2D1P54289 1103 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 ATXN7L3BQ96GX2 97 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 LGALS13Q9UHV8 139 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 MRPL11Q9Y3B7 192 aaKnown RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 MRPL42Q9Y6G3 142 aaKnown RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 CXorf49A8MYA2 514 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 FCHO1O14526 889 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 KRT34O76011 436 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 PTPN4P29074 926 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 RFC1P35251 1148 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 ABCG1P45844 678 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 IZUMO2Q6UXV1 221 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 CROCCP2Q86T23 111 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 KIAA0319LQ8IZA0 1049 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 GMCL1P1Q8NEA9 526 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 CPT1BQ92523 772 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 PSMC3IPQ9P2W1 217 aaPredicted RBP13.62□□□□□ -0.23
SNX1-201ENST00000261889 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
SNX1-201ENST00000261889 XPO7Q9UIA9 1087 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms