RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 GMPRP36959 345 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 POU5F1BQ06416 359 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 AP1B1Q10567 949 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 LAMB3Q13751 1172 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ZNF572Q7Z3I7 529 aaPredicted RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ZWINTO95229 277 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 MRPS35P82673 323 aaKnown RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 STX3Q13277 289 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 LACTB2Q53H82 288 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 SPOCD1Q6ZMY3 1216 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 TRIML2Q8N7C3 387 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 C3orf20Q8ND61 904 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 GSTCDQ8NEC7 633 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 TRAPPC12Q8WVT3 735 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 ZNF606Q8WXB4 792 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 LRGUKQ96M69 825 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 UBP1Q9NZI7 540 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 TJP2Q9UDY2 1190 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 CYP3A7-CYP3A51PA0A087WV96 503 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 SNUPNO95149 360 aaKnown RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 AMPD1P23109 780 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 TUBP50607 506 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 NME5P56597 212 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 MED21Q13503 144 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 CUL2Q13617 745 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 KLHL38Q2WGJ6 581 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 TTC25Q96NG3 672 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 ZNF408Q9H9D4 720 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 SLC17A6Q9P2U8 582 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 PLA2G4CQ9UP65 541 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 PCNTO95613 3336 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 C5P01031 1676 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 NR3C2P08235 984 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 LCP1P13796 627 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 GLRA2P23416 452 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 RFC1P35251 1148 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 NME3Q13232 169 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 C15orf59Q2T9L4 293 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 ZNF667Q5HYK9 610 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 FAM43BQ6ZT52 329 aaPredicted RBP10.56□□□□□ -0.72
PALB2-201ENST00000261584 SLFN11Q7Z7L1 901 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 OR6B3Q8NGW1 331 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 RNF217Q8TC41 542 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 USP33Q8TEY7 942 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 DNAJC16Q9Y2G8 782 aa10.56□□□□□ -0.72
PALB2-201ENST00000261584 AGRPO00253 132 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 PSMD10O75832 226 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 PROCP04070 461 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 GZMAP12544 262 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 TPD52P55327 224 aaPredicted RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 IFNEQ86WN2 208 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 DNAJC1Q96KC8 554 aaKnown RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 SYT15Q9BQS2 421 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 RPAP3Q9H6T3 665 aaPredicted RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
PALB2-201ENST00000261584 HNRNPCP07910 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
PALB2-201ENST00000261584 FGFR3P22607 806 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 AVPR1AP37288 418 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 GDF10P55107 478 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 PKNOX1P55347 436 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 CYP24A1Q07973 514 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 ART3Q13508 389 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 GLRA4Q5JXX5 417 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 VWA5B1Q5TIE3 1220 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 ATG16L1Q676U5 607 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 TRABD2AQ86V40 505 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 UNC45BQ8IWX7 931 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 SCUBE1Q8IWY4 988 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 FAM71AQ8IYT1 594 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 RCOR2Q8IZ40 523 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 DAW1Q8N136 415 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 WDR60Q8WVS4 1066 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 NID2Q14112 1375 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 GTPBP10A4D1E9 387 aaKnown RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 DNALI1O14645 258 aaPredicted RBP10.55□□□□□ -0.72
PALB2-201ENST00000261584 PSAPP07602 524 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 SMARCA1P28370 1054 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 TNFSF9P41273 254 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 NEK3P51956 506 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 MGAT5Q09328 741 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 Q4G0T1 1027 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 KRT80Q6KB66 452 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 ZBTB8OSQ8IWT0 167 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 SEC14L1Q92503 715 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 MKL1Q969V6 931 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 CENPTQ96BT3 561 aa10.55□□□□□ -0.72
PALB2-201ENST00000261584 SRPK1Q96SB4 655 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms