RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 TRAF3Q13114 568 aa8.52□□□□□ -1.05
DSG3-201ENST00000257189 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
DSG3-201ENST00000257189 C7orf61Q8IZ16 206 aa8.52□□□□□ -1.05
DSG3-201ENST00000257189 PACSIN1Q9BY11 444 aa8.52□□□□□ -1.05
DSG3-201ENST00000257189 ILKAPQ9H0C8 392 aaPredicted RBP8.52□□□□□ -1.05
DSG3-201ENST00000257189 INTS2Q9H0H0 1204 aaKnown RBP8.52□□□□□ -1.05
DSG3-201ENST00000257189 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
DSG3-201ENST00000257189 TTC7AQ9ULT0 858 aaPredicted RBP8.52□□□□□ -1.05
DSG3-201ENST00000257189 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
DSG3-201ENST00000257189 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 INO80B-WBP1J3KQ70 363 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 FDX1P10109 184 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PRLRP16471 622 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 CAPZA2P47755 286 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RAD51Q06609 339 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 SPP2Q13103 211 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ATP1A4Q13733 1029 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 CCDC144BQ3MJ40 725 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RWDD4Q6NW29 188 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 ARHGEF19Q8IW93 802 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 DHX40Q8IX18 779 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 THEM5Q8N1Q8 247 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 HES6Q96HZ4 224 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ECSITQ9BQ95 431 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ERP44Q9BS26 406 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 TRIM51Q9BSJ1 452 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 INO80BQ9C086 356 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 NMRK1Q9NWW6 199 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 TMCC3Q9ULS5 477 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ING4Q9UNL4 249 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ARPC4P59998 168 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 ANO4Q32M45 955 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 C12orf60Q5U649 245 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PLEKHH3Q7Z736 793 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 GRAMD1CQ8IYS0 662 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 DLG3Q92796 817 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 EAF2Q96CJ1 260 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 TIPINQ9BVW5 301 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PCIF1Q9H4Z3 704 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 KANSL2Q9H9L4 492 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 INPP5FQ9Y2H2 1132 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 HEY1Q9Y5J3 304 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 C3orf70A6NLC5 250 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 FSBPO95073 299 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ECDO95905 644 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 IL13P35225 146 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PRKAA2P54646 552 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 HPCAP84074 193 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 XRCC4Q13426 336 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PTK6Q13882 451 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ARID5BQ14865 1188 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 KNOP1Q1ED39 458 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 PGBD3Q8N328 593 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 WDR36Q8NI36 951 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 MAGED2Q9UNF1 606 aaPredicted RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 AKT3Q9Y243 479 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 CYP21A2P08686 494 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ZNF23P17027 643 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RGS4P49798 205 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 MZT2AQ6P582 158 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 ZBTB49Q6ZSB9 765 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 C16orf62Q7Z3J2 963 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
DSG3-201ENST00000257189 TMPRSS6Q8IU80 811 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RAD54LQ92698 747 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RORBQ92753 470 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 FAM122AQ96E09 287 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 WDR24Q96S15 920 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 RGS18Q9NS28 235 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PHTF1Q9UMS5 762 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 PREX1Q8TCU6 1659 aa8.51□□□□□ -1.05
DSG3-201ENST00000257189 WEE2P0C1S8 567 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 ITGAXP20702 1163 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TKTP29401 623 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 MAGEA4P43358 317 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CCZ1BP86790 482 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CCZ1P86791 482 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 DRAP1Q14919 205 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 KRT77Q7Z794 578 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 ZNF554Q86TJ5 538 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 JAMLQ86YT9 394 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 SCFD2Q8WU76 684 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 YME1L1Q96TA2 773 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 DDX50Q9BQ39 737 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 HDHD2Q9H0R4 259 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 METTL5Q9NRN9 209 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 TOPORSQ9NS56 1045 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 FKBP14Q9NWM8 211 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 EIF3LQ9Y262 564 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 FRMPD2Q68DX3 1309 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms