RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 P3H4Q92791 437 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 CPB2Q96IY4 423 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 CCDC77Q9BR77 488 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 FDXACB1Q9BRP7 624 aaPredicted RBP20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 NFKBIZQ9BYH8 718 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 FGFR1OP2Q9NVK5 253 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 PRMT7Q9NVM4 692 aaPredicted RBP20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 SNX3O60493 162 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 IFNB1P01574 187 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 CD48P09326 243 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 PTPN11Q06124 597 aaPredicted RBP20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 MORF4L2Q15014 288 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 CEP128Q6ZU80 1094 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 ACTL9Q8TC94 416 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 FNIP1Q8TF40 1166 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 CKAP2Q8WWK9 683 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 OPTNQ96CV9 577 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 CFAP57Q96MR6 1250 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 NSRP1Q9H0G5 558 aaKnown RBP20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 PCDH9Q9HC56 1237 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 CILPO75339 1184 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 RASSF9O75901 435 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 OAS1P00973 400 aaKnown RBP20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 GHRP10912 638 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 GDF10P55107 478 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 OTUD4Q01804 1114 aaKnown RBP20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 ARHGAP1Q07960 439 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 PPIL2Q13356 520 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 TTLL12Q14166 644 aaPredicted RBP20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 TMED2Q15363 201 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
CDC42EP1-201ENST00000249014 EXOC1LA0A1B0GW35 172 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 CST8O60676 142 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 MICAL2O94851 1124 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 KDELR1P24390 212 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 PHKA2P46019 1235 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 GSCP56915 257 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 TAF5Q15542 800 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 PRCCQ92733 491 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 CDCA5Q96FF9 252 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 MROH8Q9H579 483 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 SLC40A1Q9NP59 571 aa20.54■□□□□ 0.88
CDC42EP1-201ENST00000249014 KRT7P08729 469 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 TAZQ16635 292 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 FAM187BQ17R55 369 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 SLC10A6Q3KNW5 377 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 ARMCX2Q7L311 632 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 TMEM176AQ96HP8 235 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 SYNCQ9H7C4 482 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 PCSK1NQ9UHG2 260 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 EFR3BQ9Y2G0 817 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 RASA4BC9J798 803 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 RASA4O43374 803 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 BANF1O75531 89 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 LGALS2P05162 132 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 MCF2P10911 925 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 OSBPP22059 807 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 GAD2Q05329 585 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 HADHQ16836 314 aaKnown RBP20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 NUGGCQ68CJ6 796 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 SMYD5Q6GMV2 418 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 CAPN12Q6ZSI9 719 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 ZBED8Q8IZ13 594 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 LINC01465Q8N7H1 131 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 TTC25Q96NG3 672 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 SHOC2Q9UQ13 582 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 FARP1Q9Y4F1 1045 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 ACTL7BQ9Y614 415 aa20.53■□□□□ 0.88
CDC42EP1-201ENST00000249014 GOLGA8MH3BSY2 632 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ALOX15BO15296 676 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 VTNP04004 478 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ARF4P18085 180 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ZNF268Q14587 947 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 BBS12Q6ZW61 710 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 RIBC1Q8N443 379 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 WDR35Q9P2L0 1181 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 PLXNA1Q9UIW2 1896 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 POC1B-GALNT4F8VUJ3 575 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 M0QYV0 167 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 GPD2P43304 727 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 POU5F1BQ06416 359 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 MYO1EQ12965 1108 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 PDIA2Q13087 525 aaKnown RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ZNF484Q5JVG2 852 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 MAP1SQ66K74 1059 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ILDR2Q71H61 639 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 TRPM8Q7Z2W7 1104 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 SUGP1Q8IWZ8 645 aaKnown RBP20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 MCRS1Q96EZ8 462 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 FAXDC2Q96IV6 333 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 ABCF3Q9NUQ8 709 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 HAUS2Q9NVX0 235 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 AKT3Q9Y243 479 aa20.52■□□□□ 0.88
CDC42EP1-201ENST00000249014 MIPP30301 263 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 STX2P32856 288 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 GABRB2P47870 512 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms