RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 AARSP49588 968 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 ERCC6LQ2NKX8 1250 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 PAN2Q504Q3 1202 aaKnown RBP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 TIGD5Q53EQ6 642 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 OSTM1Q86WC4 334 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 ANKRD52Q8NB46 1076 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 SPATA18Q8TC71 538 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 GOLGA8SH3BPF8 625 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 HCRTO43612 131 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 PROSCO94903 275 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 KRT3P12035 628 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 CCDC130P13994 396 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 PTPN1P18031 435 aaKnown RBP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 IGFBP6P24592 240 aaPredicted RBP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 PCSK1P29120 753 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 GABRB2P47870 512 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 BCAT1P54687 386 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 BST2Q10589 180 aaKnown RBP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 UBE2Q1Q7Z7E8 422 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 MS4A14Q96JA4 679 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 MCEEQ96PE7 176 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 TBC1D13Q9NVG8 400 aa19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 TIMM13Q9Y5L4 95 aaPredicted RBP19.78■□□□□ 0.76
TNFSF9-201ENST00000245817 DDX3YO15523 660 aaKnown RBP19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 ERBB2P04626 1255 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 ACAT1P24752 427 aaKnown RBP19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 OR1G1P47890 313 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 GSCP56915 257 aaPredicted RBP19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 ELF2Q15723 593 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 CLUL1Q15846 466 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 CCDC70Q6NSX1 233 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 RSRC2Q7L4I2 434 aaKnown RBP19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 XYLT1Q86Y38 959 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 SLC2A14Q8TDB8 520 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 HASPINQ8TF76 798 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 TSC1Q92574 1164 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 MED10Q9BTT4 135 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 PLVAPQ9BX97 442 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 CDH9Q9ULB4 789 aa19.77■□□□□ 0.76
TNFSF9-201ENST00000245817 TMEM191CA6NGB0 347 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 SIGLEC16A6NMB1 481 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 PDE2AO00408 941 aaPredicted RBP19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 CAPN15O75808 1086 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 DDHD2O94830 711 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 CTNNA2P26232 953 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 BRCC3P46736 316 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 RNASE9P60153 205 aaKnown RBP19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 NAA30Q147X3 362 aaPredicted RBP19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 PKDCCQ504Y2 493 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 OR6B2Q6IFH4 312 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 TTC30AQ86WT1 665 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 ZNF280BQ86YH2 543 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 THEM5Q8N1Q8 247 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 STK32AQ8WU08 396 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 RSPH1Q8WYR4 309 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 HNRNPABQ99729 332 aaKnown RBP19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 LPIN3Q9BQK8 851 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 SYT15Q9BQS2 421 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 TRIM7Q9C029 511 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 CARD9Q9H257 536 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 TBX21Q9UL17 535 aa19.76■□□□□ 0.75
TNFSF9-201ENST00000245817 TCRBV5S1A1TA0A578 114 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 M0QZQ0 153 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 TRAPPC3O43617 180 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 GJB6O95452 261 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 CYP11A1P05108 521 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 PFKMP08237 780 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 CTNNA1P35221 906 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 RFC2P35250 354 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 SSR1P43307 286 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 RGS7P49802 495 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 RPL7AP62424 266 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 ITIH3Q06033 890 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 PDE4CQ08493 712 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 DSC1Q08554 894 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 IKBKEQ14164 716 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 PIGHQ14442 188 aaPredicted RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 ZNF572Q7Z3I7 529 aaPredicted RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 COLGALT2Q8IYK4 626 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 SPATA4Q8NEY3 305 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 ACTRT1Q8TDG2 376 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 SLC35F5Q8WV83 523 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 SUSD3Q96L08 255 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 NAP1L3Q99457 506 aaPredicted RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 MRPL9Q9BYD2 267 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 PCDHA3Q9Y5H8 950 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 I3L4J1 428 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 PGRMC1O00264 195 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 ATP2C2O75185 946 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 MAN1A1P33908 653 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 ACADSBP45954 432 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 RWDD2BP57060 319 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 MDH1BQ5I0G3 518 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 FAM102AQ5T9C2 384 aaPredicted RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 SEL1L2Q5TEA6 688 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 CNKSR3Q6P9H4 555 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 NPAS4Q8IUM7 802 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 GPR161Q8N6U8 529 aaKnown RBP19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 CD101Q93033 1021 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms