RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 EXTL3O43909 919 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 TGDSO95455 350 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 ESRRAP11474 423 aaPredicted RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 PTGER2P43116 358 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 RAB27AP51159 221 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 JAK3P52333 1124 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 AP1B1Q10567 949 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 ZC3H18Q86VM9 953 aaKnown RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 MCEEQ96PE7 176 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 MMADHCQ9H3L0 296 aaPredicted RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 WDR35Q9P2L0 1181 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 RARBP10826 455 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 ETV4P43268 484 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX55-201ENST00000238146 SYTL5Q8TDW5 730 aaPredicted RBP16.28■□□□□ 0.2
DDX55-201ENST00000238146 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 PHACTR1Q9C0D0 580 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
DDX55-201ENST00000238146 E7ESA3 106 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 LPXNO60711 386 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 CAP2P40123 477 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 ACOT2P49753 483 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 NLRP11P59045 1033 aaKnown RBP16.27■□□□□ 0.2
DDX55-201ENST00000238146 PPP1R15BQ5SWA1 713 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 FOXB2Q5VYV0 432 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 CHSY1Q86X52 802 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 PALM2Q8IXS6 379 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 TAB3Q8N5C8 712 aaPredicted RBP16.27■□□□□ 0.2
DDX55-201ENST00000238146 ZNF606Q8WXB4 792 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 GATA6Q92908 595 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 STMN2Q93045 179 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 TAAR1Q96RJ0 339 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 KRT82Q9NSB4 513 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 CNTN6Q9UQ52 1028 aa16.27■□□□□ 0.2
DDX55-201ENST00000238146 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.2
DDX55-201ENST00000238146 TCRBV7S3A2A0A539 114 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 TCRBV5S1A1TA0A578 114 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 MT-ND3P03897 115 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 SFNP31947 248 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 THOC5Q13769 683 aaKnown RBP16.27■□□□□ 0.19
DDX55-201ENST00000238146 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 KBTBD2Q8IY47 623 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 ACTL9Q8TC94 416 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 FAM111AQ96PZ2 611 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 PPP1R12CQ9BZL4 782 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.19
DDX55-201ENST00000238146 KLHL33A6NCF5 533 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 FCHO1O14526 889 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 MYL2P10916 166 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 BGNP21810 368 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 KCNA3P22001 575 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 NEK3P51956 506 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 DYNLT1P63172 113 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 DLGAP5Q15398 846 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 PPP1R2P3Q6NXS1 205 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 PDCD7Q8N8D1 485 aaKnown RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 PPFIBP2Q8ND30 876 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 ZFAND2BQ8WV99 257 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 OXNAD1Q96HP4 312 aaPredicted RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 SERAC1Q96JX3 654 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 ARMCX1Q9P291 453 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 ZNF212Q9UDV6 495 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 WASF2Q9Y6W5 498 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 ZNF862O60290 1169 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 TMEM63AO94886 807 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 GSTA2P09210 222 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 RPL22P35268 128 aaKnown RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 GCLCP48506 637 aaPredicted RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 KRT76Q01546 638 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 OTUD4Q01804 1114 aaKnown RBP16.26■□□□□ 0.19
DDX55-201ENST00000238146 PGM5Q15124 567 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 DNAJC24Q6P3W2 148 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 DCUN1D2Q6PH85 259 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 TTC17Q96AE7 1141 aa16.26■□□□□ 0.19
DDX55-201ENST00000238146 C3orf70A6NLC5 250 aaPredicted RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 AMPD1P23109 780 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 PGM1P36871 562 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 LIG4P49917 911 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 ZRSR2Q15696 482 aaKnown RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 SH2D5Q6ZV89 423 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 MCF2L2Q86YR7 1114 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 XPNPEP1Q9NQW7 623 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 ETAA1Q9NY74 926 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 CNTN3Q9P232 1028 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms