RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 CCDC33Q8N5R6 958 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 SPATA18Q8TC71 538 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 NRBP2Q9NSY0 501 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 KCNG1Q9UIX4 513 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 GRID1Q9ULK0 1009 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 IQANK1A0A1B0GTG1 560 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 COPEO14579 308 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 ZWINTO95229 277 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 MMP8P22894 467 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
NEFM-201ENST00000221166 SERPINB3P29508 390 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 RPL22P35268 128 aaKnown RBP11.72□□□□□ -0.53
NEFM-201ENST00000221166 TMPRSS15P98073 1019 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 DUOXA2Q1HG44 320 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 NTPCRQ9BSD7 190 aaKnown RBP11.72□□□□□ -0.53
NEFM-201ENST00000221166 FBXO6Q9NRD1 293 aaPredicted RBP11.72□□□□□ -0.53
NEFM-201ENST00000221166 SLC24A2Q9UI40 661 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 PYGBP11216 843 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 YY1P25490 414 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 CDH6P55285 790 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 JOSD2Q8TAC2 188 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 CYTH2Q99418 400 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
NEFM-201ENST00000221166 PEX10O60683 326 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 SMIM24O75264 130 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 KRT7P08729 469 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 CD48P09326 243 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 PTPN4P29074 926 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 ELK3P41970 407 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 YARSP54577 528 aaKnown RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 RCN1Q15293 331 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 CASC4Q6P4E1 433 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 NPNTQ6UXI9 565 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 DNAJC9Q8WXX5 260 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 POLIQ9UNA4 740 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 WNK3Q9BYP7 1800 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 ENO1P06733 434 aaKnown RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 IGBP1P78318 339 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 KDSRQ06136 332 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 MCL1Q07820 350 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 FAAP100Q0VG06 881 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 PTP4A2Q12974 167 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 SUPT20HL1Q3ZLR7 823 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 C6orf163Q5TEZ5 329 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 ASRGL1Q7L266 308 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 SAMD7Q7Z3H4 446 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 UTP4Q969X6 686 aaKnown RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 HEXIM2Q96MH2 286 aaKnown RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 WRNIP1Q96S55 665 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 DENND2DQ9H6A0 471 aaPredicted RBP11.71□□□□□ -0.53
NEFM-201ENST00000221166 RAB6BQ9NRW1 208 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
NEFM-201ENST00000221166 TCRBV7S3A2A0A539 114 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 AVILO75366 819 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 OATP04181 439 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 ACVR2BQ13705 512 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 FAM102AQ5T9C2 384 aaPredicted RBP11.71□□□□□ -0.54
NEFM-201ENST00000221166 RDM1Q8NG50 284 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 UBA3Q8TBC4 463 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.54
NEFM-201ENST00000221166 TMEM120AQ9BXJ8 343 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.54
NEFM-201ENST00000221166 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.54
NEFM-201ENST00000221166 CCDC22O60826 627 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 GPX6P59796 221 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 ZNF200P98182 395 aaPredicted RBP11.7□□□□□ -0.54
NEFM-201ENST00000221166 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 STXBP2Q15833 593 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 RFWD3Q6PCD5 774 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 ZBTB8OSQ8IWT0 167 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 ADPGKQ9BRR6 497 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 ARL8BQ9NVJ2 186 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 EP400Q96L91 3159 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 TRIM49D1C9J1S8 452 aa11.7□□□□□ -0.54
NEFM-201ENST00000221166 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
NEFM-201ENST00000221166 PRPF4O43172 522 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms