RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 DDX42Q86XP3 938 aaKnown RBP eCLIP15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SH3GL2Q99962 352 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SLC4A5Q9BY07 1137 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 OSBPL8Q9BZF1 889 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SYNCQ9H7C4 482 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 ZDHHC18Q9NUE0 388 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SLC38A7Q9NVC3 462 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 TJP2Q9UDY2 1190 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 NME7Q9Y5B8 376 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 GRIN2DO15399 1336 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 GOLGA8SH3BPF8 625 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 PTGESO14684 152 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 SPTLC1O15269 473 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 HSF2BPO75031 334 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 RALAP11233 206 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 PSMA2P25787 234 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 SNX16P57768 344 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 CCNG2Q16589 344 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 GOLGA7BQ2TAP0 167 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 SPDYCQ5MJ68 293 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 DAB2IPQ5VWQ8 1189 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 MRPL10Q7Z7H8 261 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 TOP6BLQ8N6T0 577 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 JOSD2Q8TAC2 188 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 KBTBD7Q8WVZ9 684 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 SLITRK1Q96PX8 696 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 HERPUD2Q9BSE4 406 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 DCLK3Q9C098 648 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 NEUROG2Q9H2A3 272 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM105AQ9NUU6 356 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 EFR3BQ9Y2G0 817 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 ECEL1O95672 775 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 GNRH1P01148 92 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 WARSP23381 471 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 GGCXP38435 758 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM47CQ5HY64 1035 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM26DQ5JW98 314 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 TMEM110Q86TL2 294 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 ACOT1Q86TX2 421 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 CCDC105Q8IYK2 499 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 UBA3Q8TBC4 463 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 PXYLP1Q8TE99 480 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 SLC35F5Q8WV83 523 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 CYLDQ9NQC7 956 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 GIT1Q9Y2X7 761 aa15.09■□□□□ 0.01
RTFDC1-201ENST00000023939 THSD7BQ9C0I4 1608 aa15.08■□□□□ 0.01
RTFDC1-201ENST00000023939 A8MXQ7 604 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 OPA1O60313 960 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 ZNF623O75123 536 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 CAND2O75155 1236 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 KRT7P08729 469 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 ELNP15502 786 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 TCF4P15884 667 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 SSR1P43307 286 aaKnown RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 RPL34P49207 117 aaKnown RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 LILRA4P59901 499 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 SLC25A11Q02978 314 aaKnown RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 PTK7Q13308 1070 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 MTMR3Q13615 1198 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 PTGISQ16647 500 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 HADHQ16836 314 aaKnown RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 CFAP58Q5T655 872 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 DRICH1Q6PGQ1 229 aaPredicted RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 TTC30AQ86WT1 665 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 ZDHHC17Q8IUH5 632 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 CCDC50Q8IVM0 306 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 C12orf29Q8N999 325 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 APPL2Q8NEU8 664 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 OR6B3Q8NGW1 331 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 GRK7Q8WTQ7 553 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 PKNOX2Q96KN3 472 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 TXLNGYQ9BZA5 131 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 DPH5Q9H2P9 285 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 METTL5Q9NRN9 209 aaKnown RBP15.08■□□□□ 0
RTFDC1-201ENST00000023939 CREBZFQ9NS37 354 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 GRHL1Q9NZI5 618 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 HESX1Q9UBX0 185 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 SQORQ9Y6N5 450 aa15.08■□□□□ 0
RTFDC1-201ENST00000023939 DPYSL4O14531 572 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 LRCH4O75427 683 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 KRT1P04264 644 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 FGFR1P11362 822 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 PCK1P35558 622 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 GNL1P36915 607 aaPredicted RBP15.07■□□□□ 0
RTFDC1-201ENST00000023939 SCNN1AP37088 669 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 RAB27AP51159 221 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
RTFDC1-201ENST00000023939 TERF2Q15554 542 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 TAZQ16635 292 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 LRIG3Q6UXM1 1119 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 SPOCD1Q6ZMY3 1216 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 RNF180Q86T96 592 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 ARFGAP1Q8N6T3 406 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms