RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Rex1bdQ9CYZ6 169 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Xpo7Q9EPK7 1087 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rfx5Q9JL61 658 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zswim8Q3UHH1 1832 aaKnown RBP13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Col4a3Q9QZS0 1669 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rabgap1A2AWA9 1064 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ssxb9A2BI93 185 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 MafgO54790 162 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Nos2P29477 1144 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Scp2P32020 547 aaKnown RBP13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mmp20P57748 482 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 DselQ0VBN2 1207 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kcnc2Q14B80 642 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Arhgap45Q3TBD2 1116 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Q3UE31 404 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ugt3a1Q3UP75 523 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tom1l2Q5SRX1 507 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 PterQ60866 349 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 FAM120AQ6A0A9 1112 aaKnown RBP13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Elac2Q80Y81 831 aaKnown RBP13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Chmp2bQ8BJF9 213 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Pgm5Q8BZF8 567 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ccser1Q8C0C4 895 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kdelr1Q99JH8 212 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Map4k3Q99JP0 894 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ptdss1Q99LH2 473 aaKnown RBP13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 PdiltQ9DAN1 588 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Riok3Q9DBU3 519 aaKnown RBP13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ropn1Q9ESG2 212 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Psmg1Q9JK23 289 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Trpc3Q9QZC1 836 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kcnd2Q9Z0V2 630 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 Crlf3Q9Z2L7 442 aa13.52□□□□□ -0.24
Nup88-203ENSMUST00000108531 B020011L13RikA0A087WQI7 412 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dnase1l3O55070 310 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 PigrO70570 771 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Stmn1P54227 149 aaKnown RBP13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Zscan2Q07230 614 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ksr1Q61097 873 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Garem2Q6PAJ3 880 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 NfascQ810U3 1240 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 PimregQ8BFY7 231 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gpc3Q8CFZ4 579 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 NelfcdQ922L6 591 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gps1Q99LD4 471 aaKnown RBP13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Sun1Q9D666 913 aaKnown RBP13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tmco5aQ9D9D5 303 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nudt5Q9JKX6 218 aa13.52□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr456B2RT27 312 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tnni3P48787 211 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 HpdP49429 393 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Eif3eP60229 445 aaKnown RBP13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Psmc1P62192 440 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 YwhaeP62259 255 aaKnown RBP13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pfkfb2P70265 519 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cntn3Q07409 1028 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ccndbp1Q3TVC7 356 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mif4gdQ3UBZ5 222 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Garnl3Q3V0G7 1038 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Prkaa1Q5EG47 559 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Srd5a1Q68FF9 255 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ccdc40Q8BI79 1192 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dars2Q8BIP0 653 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ints6lQ8BND4 861 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Angel1Q8VCU0 667 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ddx39aQ8VDW0 427 aaKnown RBP13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr458Q8VF80 313 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr457Q8VGP5 313 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Plcb4Q91UZ1 1175 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pcdhb1Q91Y08 818 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fndc3c1Q6DFV6 1356 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Per2O54943 1257 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Magea5O89009 320 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Magea8O89012 320 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ass1P16460 412 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 RarbP22605 482 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pms2P54279 859 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cyb5d1Q5NCY3 228 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Magea3Q6T340 320 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nipal4Q8BZF2 406 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 4921504E06RikQ8CET2 560 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fcho1Q8K285 873 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mcoln2Q8K595 566 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dpp3Q99KK7 738 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Arl8bQ9CQW2 186 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fam212aQ9CX62 282 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mxra7Q9CZH7 178 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tmem68Q9D850 329 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tmod2Q9JKK7 351 aa13.51□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm29554A0A087WNW4 188 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Vmn2r104E9Q2J5 860 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Sstr3P30935 428 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Elk3P41971 409 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Slc1a2P43006 572 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Serping1P97290 504 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lrch2Q3UMG5 773 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tmprss11eQ5S248 423 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Grb10Q60760 621 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nab1Q61122 486 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cyp3a16Q64481 504 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms