RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Smap1Q91VZ6 440 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ergic2Q9CR89 377 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 AenQ9CZI9 336 aaKnown RBP19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tssk3Q9D2E1 268 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Clca1Q9D7Z6 913 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 CrotQ9DC50 612 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ppp2r3cQ9JK24 453 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 XdhQ00519 1335 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Fam81bA0A140LI28 432 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Lipo2D3YY49 398 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Siah1aP61092 282 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ugt1a2P70691 533 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tigd5Q499M4 642 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dpysl3Q62188 570 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Nat14Q8BVG8 206 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Vmn1r199Q8R280 367 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Vps39Q8R5L3 886 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Gsg1l2M0QWL6 290 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 GzmgP13366 248 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Serpinh1P19324 417 aaKnown RBP19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Uchl4P58321 233 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ceacam5Q3UKK2 947 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ubxn7Q6P5G6 467 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tmc3Q7TQ69 1130 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Baiap2l2Q80Y61 522 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dmap1Q9JI44 468 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Neu2Q9JMH3 379 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Zscan4-ps1A0A1C7CYV3 506 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Zscan4dA7KBS4 506 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Gm20509G3UZF1 325 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Atxn10P28658 475 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 ThraP63058 492 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ppp3caP63328 521 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Lilrb3P97484 841 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Zscan4fQ3URS2 506 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Zscan4cQ80VJ6 506 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Stau2Q8CJ67 570 aaKnown RBP19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Pcdha9Q91Y11 979 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tnip2Q99JG7 430 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Sh3bp5lQ99LH9 392 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Trpd52l3Q9CQ14 231 aa19.63■□□□□ 0.73
Upf1-201ENSMUST00000075666 Znf711A2ANX9 761 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Cep295nlQ497N6 533 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 TwnkQ8CIW5 685 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Glra3Q91XP5 464 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ror1Q9Z139 937 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Vmn2r63E9Q0K5 859 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Gm9268E9Q0M3 861 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 E230025N22RikG5E8S3 482 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Vmn2r62K7N712 859 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Pik3r2O08908 722 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Rpl10aP53026 217 aaKnown RBP19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Map3k10Q66L42 940 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Depdc1aQ8CIG0 804 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Sh3kbp1Q8R550 709 aaKnown RBP19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ropn1Q9ESG2 212 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 ZfrO88532 1074 aaKnown RBP19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Stam2O88811 523 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Lrrc24Q8BHA1 521 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Wrap53Q8VC51 532 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ppp1r3aQ99MR9 1089 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Msh5Q9QUM7 833 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tnni1Q9WUZ5 187 aa19.62■□□□□ 0.73
Upf1-201ENSMUST00000075666 Smok3aC0HKC8 504 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Smok3bC0HKC9 504 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Klra7Q60654 280 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dclk2Q6PGN3 756 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dusp4Q8BFV3 398 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 NcaphQ8C156 731 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tspan14Q8QZY6 270 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Tfr2Q9JKX3 798 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Trpc4Q9QUQ5 974 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Robo1O89026 1612 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dhx35A2ACQ1 703 aaKnown RBP19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Mark2Q05512 776 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Znf112Q0VAW7 879 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Fbxo39Q5NBU5 443 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Clic5Q8BXK9 251 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Zfp566Q8VCI1 386 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Rexo2Q9D8S4 237 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Ppp1r2Q9DCL8 206 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Rasgrp2Q9QUG9 608 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Crabp2P22935 138 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Vps33bP59016 617 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Creb1Q01147 341 aaKnown RBP19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Lrrc8dQ8BGR2 859 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Gpsm2Q8VDU0 679 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Rmi1Q9D4G9 616 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Sapcd2Q9D818 391 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 CdylQ9WTK2 593 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Crb1Q8VHS2 1405 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Pds5aQ6A026 1332 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 InhbeO08717 350 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Birc5O70201 140 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Rtkn2Q14B46 604 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Papd5Q68ED3 633 aaKnown RBP19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Hmgb4Q6P8W9 181 aa19.61■□□□□ 0.73
Upf1-201ENSMUST00000075666 Shroom1Q5SX79 823 aa19.6■□□□□ 0.73
Upf1-201ENSMUST00000075666 Dlg4Q62108 724 aa19.6■□□□□ 0.73
Upf1-201ENSMUST00000075666 Krt73Q6NXH9 539 aa19.6■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms