RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Slc9a4Q8BUE1 797 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rhpn2Q8BWR8 686 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Uba3Q8C878 462 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mcoln1Q99J21 580 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 CmasQ99KK2 432 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Acbd6Q9D061 282 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Phf14Q9D4H9 881 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rnf225Q9D7D1 332 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 GatmQ9D964 423 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Timp4Q9JHB3 224 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Alpk2Q91ZB0 2144 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm4924A0A1B0GR71 966 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup10A2BIN1 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup14A2CEK7 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Lrrc63A6H694 637 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup19A9C497 187 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup15A9R9W0 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup17B5X0G2 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup8E9PVW0 235 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Apol11aE9PZG0 334 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm3127E9Q9P5 263 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup7E9QA79 235 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm3453K7N724 263 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ube3aO08759 870 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup6P02762 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Enpp1P06802 906 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup1P11588 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup2P11589 180 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gna15P30678 374 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Stat5aP42230 793 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gdf7P43029 461 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Anxa5P48036 319 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nudt1P53368 156 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 NrlP54846 237 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 MylpfP97457 169 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mindy4Q3UQI9 744 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Skap1Q3UUV5 355 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mapk6Q61532 720 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Dmc1Q61880 340 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sema4bQ62179 823 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tbc1d31Q6NXY1 996 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Stk40Q7TNL3 435 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pcsk9Q80W65 694 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Wdtc1Q80ZK9 677 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nod1Q8BHB0 953 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Q8CD60 292 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Olfr345Q8VGK4 311 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sh3d19Q91X43 789 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pcdha11Q91Y19 950 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ddx27Q921N6 760 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pin4Q9CWW6 131 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ifi35Q9D8C4 286 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Plxna3P70208 1872 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm10720D3Z1I5 223 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Vmn2r111K7N674 857 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup13L7N222 235 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gucy1b3O54865 620 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Smpd2O70572 419 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 UrosP51163 265 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rhox5P52651 210 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 LipeP54310 759 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Adamts1P97857 968 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Krt86P97861 486 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tatdn3Q3U1C6 294 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pik3r6Q3U6Q4 756 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Smarcd1Q61466 515 aaKnown RBP9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Prm3Q62100 101 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Prl3a1Q78Y73 227 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Usp1Q8BJQ2 784 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nrip1Q8CBD1 1161 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 DeraQ91YP3 318 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 AdarQ99MU3 1178 aaKnown RBP9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Lgals2Q9CQW5 130 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ctnnbl1Q9CWL8 563 aaKnown RBP9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cul2Q9D4H8 745 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Akr1a1Q9JII6 325 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Dclk1Q9JLM8 756 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nme7Q9QXL8 395 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Trpv2Q9WTR1 756 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Padi3Q9Z184 664 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rpl9-ps1S4R1R7 191 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 MgamB5THE2 1827 aa9.37□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm5485A0A1D5RM98 91 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Scrg1O88745 98 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Odc1P00860 461 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ifnb1P01575 182 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 PrnpP04925 254 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fam167bP17257 162 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Kcnj6P48542 425 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Aff3P51827 1254 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rad23aP54726 363 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Serpina5P70458 405 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nhej1Q3KNJ2 295 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fubp3Q3TIX6 575 aaKnown RBP9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 B230104I21RikQ3USW4 141 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm5935Q497S0 212 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sin3bQ62141 1098 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sytl5Q80T23 753 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ints2Q80UK8 1198 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rnf168Q80XJ2 565 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms