RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Olfr449Q8VGW8 311 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Necab2Q91ZP9 389 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cyp4f16Q99N17 524 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Prss23Q9D6X6 382 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Angptl2Q9R045 493 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm43302L7N1X8 611 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Vmn2r15L7N2A0 855 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Timm44O35857 452 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Grpel2O88396 224 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Msr1P30204 458 aaKnown RBP11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gbp10Q000W5 611 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Bnip1Q6QD59 228 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gpr151Q7TSN6 422 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Itm2cQ91VK4 269 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 ParvaQ9EPC1 372 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3371F7CQW8 167 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 RxrbP28704 520 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Vcam1P29533 739 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trim75Q3UWZ0 467 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Snx25Q3ZT31 840 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm13103Q4VAD2 491 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 HpseQ6YGZ1 535 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfml3Q8BK62 406 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cabcoco1Q8CDT7 208 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr615Q8VGY4 313 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mfsd5Q921Y4 450 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cyp4f14Q9EP75 524 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Myo18aQ9JMH9 2050 aaKnown RBP11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Smok3aC0HKC8 504 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Smok3bC0HKC9 504 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Kpna7C0LLJ0 499 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Arhgap45Q3TBD2 1116 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 YarsQ91WQ3 528 aaKnown RBP11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tbk1Q9WUN2 729 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lilra5D3Z7A9 295 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 GckP52792 465 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfm3P63056 478 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mif4gdQ3UBZ5 222 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Parp3Q3ULW8 533 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Capn13Q3UW68 665 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Capn3Q64691 821 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zfp263Q8CF60 680 aa11.81□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Glud1P26443 558 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rpl22P67984 128 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ttc39dQ0VF76 604 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Q3TQQ9 903 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Xpnpep1Q6P1B1 623 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ipo5Q8BKC5 1097 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Senp7Q8BUH8 1037 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trmt13Q8BYH3 481 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fam205a1D3YZF6 1314 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rps6P62754 249 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Glt6d1Q2NKH9 311 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tgfbrap1Q3UR70 860 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Uts2bQ765I1 113 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Daam1Q8BPM0 1077 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lrif1Q8CDD9 755 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pcdhb7Q8CDY9 829 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rmnd1Q8CI78 450 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Agap3Q8VHH5 910 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lpin3Q99PI4 848 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ino80bQ99PT3 375 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Oma1Q9D8H7 521 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ndufa13Q9ERS2 144 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Clcn2Q9R0A1 908 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ror1Q9Z139 937 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3187M0QWW3 260 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rfx2P48379 717 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Foxp2P58463 714 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rit2P70425 217 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nat8lQ3UGX3 299 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Brip1Q5SXJ3 1174 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mpp4Q6P7F1 635 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Galnt5Q8C102 930 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 CpzQ8R4V4 654 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dis3Q9CSH3 958 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Peak1Q69Z38 1735 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cntnap2Q9CPW0 1332 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zscan4-ps1A0A1C7CYV3 506 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zscan4dA7KBS4 506 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Aoc3O70423 765 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 IkbkgO88522 412 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 M6prP24668 278 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Psma2P49722 234 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Taf1bP97358 586 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trim71Q1PSW8 855 aaKnown RBP11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zscan4fQ3URS2 506 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trim38Q5SZ99 471 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Grid1Q61627 1009 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Six1Q62231 284 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zscan4cQ80VJ6 506 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fbxw8Q8BIA4 598 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ccdc151Q8BSN3 593 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lmo3Q8BZL8 145 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Q9CYI0 393 aa11.8□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pds5aQ6A026 1332 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lrrc73B2RWC4 316 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Shoc2O88520 582 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 GcP21614 476 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pitpnm3Q3UHE1 974 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms