RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Rnf113a2Q14B01 337 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Samhd1Q60710 627 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fastkd1Q6DI86 829 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Elmo2Q8BHL5 732 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Oma1Q9D8H7 521 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Plcg1Q62077 1302 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Arhgap33Q80YF9 1305 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Kcng1A2BDX4 514 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Srp72F8VQC1 671 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Wnt7aP24383 349 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Kiaa0319Q5SZV5 1081 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 ChfrQ810L3 664 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Q9CYI0 393 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 1700123K08RikQ9D991 295 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Lrrc46Q9DAP0 323 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Wdr72D3YYM4 1114 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Smcr8Q3UMB5 935 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Camta2Q80Y50 1208 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Bhmt2Q91WS4 363 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Dqx1Q924H9 718 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Prl2c5Q9JLV9 222 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 TriqkB2B9E1 86 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ndufs6P52503 116 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Krt73Q6NXH9 539 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pdk1Q8BFP9 434 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Afg3l2Q8JZQ2 802 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gprc5cQ8K3J9 440 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Glra3Q91XP5 464 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ybx3Q9JKB3 361 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Hnrnph3D3Z3N4 346 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Hoxb8P09632 243 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fmr1P35922 614 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tlx1P43345 332 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tlr8P58682 1032 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Rbm20Q3UQS8 1199 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Armcx5Q3UZB0 606 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pip5kl1Q6U7H8 395 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Prr33Q8C494 260 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Depdc1aQ8CIG0 804 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pdk3Q922H2 415 aaKnown RBP19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ppp1r3gQ9CW07 347 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fam171a1A2ATK9 892 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Marcksl1P28667 200 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 NfiaQ02780 532 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ceacam5Q3UKK2 947 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Olfr670Q7TRP3 312 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 RbakQ8BQC8 711 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pcdha11Q91Y19 950 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 PmpcbQ9CXT8 489 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Spag6Q9JLI7 507 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Msh5Q9QUM7 833 aa19.21■□□□□ 0.67
Ebf3-201ENSMUST00000033378 XdhQ00519 1335 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Atp8b5A3FIN4 1183 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Zfp788E9Q980 884 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Shoc2O88520 582 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 ThraP63058 492 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ripor1Q68FE6 1223 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dnali1Q8BVN8 258 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 NvlQ9DBY8 855 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Bcl10Q9Z0H7 233 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 DnmbpQ6TXD4 1580 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 L1camP11627 1260 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 S100a9P31725 113 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Msh2P43247 935 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Nsl1Q8K305 281 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Klhl36Q8R124 613 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Lpgat1Q91YX5 370 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 1700129C05RikQ9CQ77 218 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Sh2d3cQ9QZS8 854 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tagln3Q9R1Q8 199 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Lipo2D3YY49 398 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 MafgO54790 162 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Il1rapl1P59823 695 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 VcpQ01853 806 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tmc5Q32NZ6 967 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Armc6Q8BNU0 468 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 D630039A03RikQ8K0M7 236 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Scgb2b12S4R2L0 112 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Atf6F6VAN0 656 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pcdh9F8VPK8 1237 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Abce1P61222 599 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Brd9Q3UQU0 596 aaKnown RBP19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Q6GQU0 248 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm2163Q6PCY5 473 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 WdpcpQ8C456 722 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 MajinQ9D992 256 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gprc5dQ9JIL6 344 aa19.2■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Fndc1E9Q043 1732 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Usp17lbE9Q9U0 468 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mroh4G3X8W1 983 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Trim36Q80WG7 729 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ece2Q80Z60 881 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ireb2Q811J3 963 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Polr3hQ9D2C6 204 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm36028A0A0U1RPM1 299 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Unc13dB2RUP2 1085 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Itga9B8JK39 1036 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 UmpsP13439 481 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rpl10aP53026 217 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mmp20P57748 482 aa19.19■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms