RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Zbed6D2EAC2 980 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Rab17P35292 214 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 CtshP49935 333 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ppm1jQ149T7 507 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Samd11Q1RNF8 542 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pitpnm3Q3UHE1 974 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Znf507Q6ZPY5 941 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Mical2Q8BML1 960 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Hdac7Q8C2B3 938 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Unc45bQ8CGY6 931 aaKnown RBP13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Slc14a1Q8VHL0 384 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Arl8bQ9CQW2 186 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Dis3Q9CSH3 958 aaKnown RBP13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PnkpQ9JLV6 522 aaKnown RBP13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ptf1aQ9QX98 324 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tk2Q9R088 270 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gabbr1Q9WV18 960 aa13.52□□□□□ -0.25
Twistnb-201ENSMUST00000020877 StrnO55106 780 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Znf112Q0VAW7 879 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Zfp956Q3UZY6 572 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Spdye4aQ5IBH6 268 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ptger2Q62053 362 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Styk1Q6J9G1 429 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pum3Q8BKS9 647 aaKnown RBP13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Daam1Q8BPM0 1077 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Vmn1r213Q8R278 384 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tbrg4Q91YM4 630 aaKnown RBP13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Clec4aQ9QZ15 238 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Scgb2b21A0A087WQA9 112 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ttll6A4Q9E8 822 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Smyd1P97443 490 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 4933427I04RikQ3V053 235 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fbxo39Q5NBU5 443 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccdc151Q8BSN3 593 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Afg3l2Q8JZQ2 802 aaKnown RBP13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 FdpsQ920E5 353 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gmcl1Q920G9 524 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Msi2Q920Q6 346 aaKnown RBP13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 MrgbpQ9DAT2 204 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gpatch1Q9DBM1 930 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Olig1Q9JKN5 260 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gipc1Q9Z0G0 333 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 RecqlQ9Z129 648 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Mrc1Q61830 1456 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Magea1O89006 320 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Magea5O89009 320 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 EporP14753 507 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Actr2P61161 394 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 RenbpP82343 430 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tfdp1Q08639 410 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ceacam5Q3UKK2 947 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tfap2bQ61313 459 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Arl13bQ640N2 427 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Trpm4Q7TN37 1213 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tdrd7Q8K1H1 1086 aaKnown RBP13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Trpv6Q91WD2 767 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Def8Q99J78 448 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Magea2Q9R2A2 320 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccdc88cQ6VGS5 2009 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 SynrgQ5SV85 1306 aa13.51□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ms4a14A0A087WSD2 1232 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Zfp558E9Q1J0 407 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pik3r2O08908 722 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 GclmO09172 274 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 CblP22682 913 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Cd68P31996 326 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Cdh8P97291 799 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Foxred2Q3USW5 665 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pdp2Q504M2 532 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Itih3Q61704 889 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ece2Q80Z60 881 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fam49aQ8BHZ0 323 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Iqsec1Q8R0S2 961 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PhykplQ8R1K4 467 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Oma1Q9D8H7 521 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ubiad1Q9DC60 336 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 NalcnQ8BXR5 1738 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ces1cP23953 554 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 ZufspQ3T9Z9 577 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 3830417A13RikQ8BQJ2 303 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 UvragQ8K245 698 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 CygbQ9CX80 190 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Cul2Q9D4H8 745 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Sgf29Q9DA08 293 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Lilra5D3Z7A9 295 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Maml3D4QGC2 1135 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pitpnm1O35954 1243 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccnd1P25322 295 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ptgs2Q05769 604 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Spink5Q148R4 1017 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PighQ5M9N4 188 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Caprin1Q60865 707 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Q80WR5 230 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Sh3kbp1Q8R550 709 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Rex1bdQ9CYZ6 169 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Dlg5E9Q9R9 1921 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Col14a1Q80X19 1797 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gm6657A0A1B0GRJ3 277 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ssxb9A2BI93 185 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PdgfraP26618 1089 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms