RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YIP3P53633 176 aa6.07□□□□□ -1.44
LSP1YPL004C MSC3Q05812 728 aa6.07□□□□□ -1.44
LSP1YPL004C SDO1Q07953 250 aaKnown RBP6.07□□□□□ -1.44
LSP1YPL004C ATX2Q12067 313 aa6.07□□□□□ -1.44
LSP1YPL004C YOR011W-AQ3E807 68 aa6.07□□□□□ -1.44
LSP1YPL004C RPS8AP0CX39 200 aaKnown RBP6.06□□□□□ -1.44
LSP1YPL004C RPS8BP0CX40 200 aaKnown RBP6.06□□□□□ -1.44
LSP1YPL004C MRP2P10663 115 aaPredicted RBP6.06□□□□□ -1.44
LSP1YPL004C VMA7P39111 118 aa6.06□□□□□ -1.44
LSP1YPL004C MBB1P39534 108 aa6.06□□□□□ -1.44
LSP1YPL004C HAM1P47119 197 aaKnown RBP6.06□□□□□ -1.44
LSP1YPL004C YPL162CQ12042 273 aa6.06□□□□□ -1.44
LSP1YPL004C SME1Q12330 94 aaPredicted RBP6.06□□□□□ -1.44
LSP1YPL004C ATP14Q12349 124 aa6.06□□□□□ -1.44
LSP1YPL004C PRM7Q12459 698 aa6.06□□□□□ -1.44
LSP1YPL004C MRS1P07266 363 aa6.05□□□□□ -1.44
LSP1YPL004C PAU1P0CE88 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU14P0CE89 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU6P0CE90 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU18P0CE91 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU8P0CE92 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU11P0CE93 120 aa6.05□□□□□ -1.44
LSP1YPL004C RNA15P25299 296 aaPredicted RBP6.05□□□□□ -1.44
LSP1YPL004C AUA1P32450 94 aa6.05□□□□□ -1.44
LSP1YPL004C PAU13P38725 120 aa6.05□□□□□ -1.44
LSP1YPL004C SNN1P48232 102 aa6.05□□□□□ -1.44
LSP1YPL004C PAU10Q03050 120 aa6.05□□□□□ -1.44
LSP1YPL004C PAU20Q08322 120 aa6.05□□□□□ -1.44
LSP1YPL004C GEP3Q08622 556 aa6.05□□□□□ -1.44
LSP1YPL004C YPR063CQ12160 140 aa6.05□□□□□ -1.44
LSP1YPL004C ERV2Q12284 196 aa6.05□□□□□ -1.44
LSP1YPL004C YPR145C-AQ2V2P0 78 aa6.05□□□□□ -1.44
LSP1YPL004C PAU9Q3E770 120 aa6.05□□□□□ -1.44
LSP1YPL004C RPS0AP32905 252 aaKnown RBP6.04□□□□□ -1.44
LSP1YPL004C YHR173CP38864 112 aa6.04□□□□□ -1.44
LSP1YPL004C YMR244WQ04018 355 aa6.04□□□□□ -1.44
LSP1YPL004C RPB3P16370 318 aaKnown RBP6.03□□□□□ -1.44
LSP1YPL004C NNK1P36003 928 aa6.03□□□□□ -1.44
LSP1YPL004C LOA1Q06508 300 aa6.03□□□□□ -1.44
LSP1YPL004C MRPL20P22354 195 aaPredicted RBP6.02□□□□□ -1.45
LSP1YPL004C HMX1P32339 317 aa6.02□□□□□ -1.45
LSP1YPL004C RIB5P38145 238 aa6.02□□□□□ -1.45
LSP1YPL004C YER135CP40082 130 aa6.02□□□□□ -1.45
LSP1YPL004C PRE5P40302 234 aaKnown RBP6.02□□□□□ -1.45
LSP1YPL004C COX12Q01519 83 aa6.02□□□□□ -1.45
LSP1YPL004C MRPS8Q03799 155 aa6.02□□□□□ -1.45
LSP1YPL004C SCW10Q04951 389 aa6.02□□□□□ -1.45
LSP1YPL004C CCW12Q12127 133 aa6.02□□□□□ -1.45
LSP1YPL004C MLF3P32047 452 aa6.01□□□□□ -1.45
LSP1YPL004C NRG2P38082 220 aa6.01□□□□□ -1.45
LSP1YPL004C DUO1P53168 247 aaKnown RBP6.01□□□□□ -1.45
LSP1YPL004C TOM7P53507 60 aa6.01□□□□□ -1.45
LSP1YPL004C HTB2P02294 131 aa6□□□□□ -1.45
LSP1YPL004C RPS22AP0C0W1 130 aaKnown RBP6□□□□□ -1.45
LSP1YPL004C MIG3P39943 394 aa6□□□□□ -1.45
LSP1YPL004C SPI1P40092 148 aa6□□□□□ -1.45
LSP1YPL004C CYB5P40312 120 aa6□□□□□ -1.45
LSP1YPL004C RAV2Q03956 351 aa6□□□□□ -1.45
LSP1YPL004C VMA9Q3E7B6 73 aa6□□□□□ -1.45
LSP1YPL004C CYC7P00045 113 aa5.99□□□□□ -1.45
LSP1YPL004C LDS1P31379 325 aa5.99□□□□□ -1.45
LSP1YPL004C ECM25P32525 599 aa5.99□□□□□ -1.45
LSP1YPL004C AFR1P33304 620 aa5.99□□□□□ -1.45
LSP1YPL004C YRA2P36036 203 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
LSP1YPL004C MCM22P47167 239 aa5.99□□□□□ -1.45
LSP1YPL004C Q0142Q9ZZW4 58 aa5.99□□□□□ -1.45
LSP1YPL004C AME1P38313 324 aa5.98□□□□□ -1.45
LSP1YPL004C YHR022CP38763 256 aa5.98□□□□□ -1.45
LSP1YPL004C HUA1P40325 198 aa5.98□□□□□ -1.45
LSP1YPL004C YJR096WP47137 282 aa5.98□□□□□ -1.45
LSP1YPL004C STP4Q07351 490 aa5.98□□□□□ -1.45
LSP1YPL004C PCC1Q3E833 88 aa5.98□□□□□ -1.45
LSP1YPL004C RPL31BP0C2H9 113 aaKnown RBP5.97□□□□□ -1.45
LSP1YPL004C CPT1P17898 393 aa5.97□□□□□ -1.45
LSP1YPL004C SRB6P32570 121 aa5.97□□□□□ -1.45
LSP1YPL004C YPT10P38146 199 aa5.97□□□□□ -1.45
LSP1YPL004C PHS1P40857 217 aa5.97□□□□□ -1.45
LSP1YPL004C YGL185CP53100 379 aa5.97□□□□□ -1.45
LSP1YPL004C YMR253CQ04835 414 aa5.97□□□□□ -1.45
LSP1YPL004C COQ3P27680 312 aa5.96□□□□□ -1.46
LSP1YPL004C YIL163CP40448 117 aa5.96□□□□□ -1.46
LSP1YPL004C RDS3Q06835 107 aaPredicted RBP5.96□□□□□ -1.46
LSP1YPL004C RPL2AP0CX45 254 aaKnown RBP5.95□□□□□ -1.46
LSP1YPL004C RPL2BP0CX46 254 aaKnown RBP5.95□□□□□ -1.46
LSP1YPL004C RPS11AP0CX47 156 aaKnown RBP5.95□□□□□ -1.46
LSP1YPL004C RPS11BP0CX48 156 aaKnown RBP5.95□□□□□ -1.46
LSP1YPL004C SEC59P20048 519 aa5.95□□□□□ -1.46
LSP1YPL004C YMR141CP40211 102 aa5.95□□□□□ -1.46
LSP1YPL004C YIL024CP40543 189 aa5.95□□□□□ -1.46
LSP1YPL004C ATP19P81451 68 aa5.95□□□□□ -1.46
LSP1YPL004C MDN1Q12019 4910 aaKnown RBP5.94□□□□□ -1.46
LSP1YPL004C YLR302CO13544 120 aa5.94□□□□□ -1.46
LSP1YPL004C VAR1P02381 398 aa5.94□□□□□ -1.46
LSP1YPL004C SRP21P32342 167 aa5.94□□□□□ -1.46
LSP1YPL004C DAD4P69851 72 aa5.94□□□□□ -1.46
LSP1YPL004C YDR215CQ12240 137 aa5.94□□□□□ -1.46
LSP1YPL004C UTP23Q12339 254 aaKnown RBP5.94□□□□□ -1.46
LSP1YPL004C TY1A-DR3Q12441 440 aa5.94□□□□□ -1.46
LSP1YPL004C YFR035CP43608 114 aa5.93□□□□□ -1.46
LSP1YPL004C BNS1P50084 137 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms