RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C SPT6P23615 1451 aaKnown RBP2.49□□□□□ -2.01
LCB4YOR171C ECM12O13529 151 aa2.49□□□□□ -2.01
LCB4YOR171C UBC4P15731 148 aa2.49□□□□□ -2.01
LCB4YOR171C FUN14P18411 198 aa2.49□□□□□ -2.01
LCB4YOR171C YET1P35723 206 aa2.49□□□□□ -2.01
LCB4YOR171C SEN15Q04675 128 aa2.49□□□□□ -2.01
LCB4YOR171C RRT7Q07829 113 aa2.49□□□□□ -2.01
LCB4YOR171C ATG5Q12380 294 aa2.49□□□□□ -2.01
LCB4YOR171C NAG1Q8TGN9 163 aa2.49□□□□□ -2.01
LCB4YOR171C PDR10P51533 1564 aa2.49□□□□□ -2.01
LCB4YOR171C SCC2Q04002 1493 aa2.49□□□□□ -2.01
LCB4YOR171C YRF1-3P0CX14 1859 aa2.48□□□□□ -2.01
LCB4YOR171C YRF1-7P0CX15 1859 aa2.48□□□□□ -2.01
LCB4YOR171C YRF1-6P53819 1859 aa2.48□□□□□ -2.01
LCB4YOR171C YAR023CD6VPM8 179 aa2.48□□□□□ -2.01
LCB4YOR171C INO4P13902 151 aa2.48□□□□□ -2.01
LCB4YOR171C MDH2P22133 377 aa2.48□□□□□ -2.01
LCB4YOR171C MRPL11P36521 249 aaPredicted RBP2.48□□□□□ -2.01
LCB4YOR171C YAL064WP39711 94 aa2.48□□□□□ -2.01
LCB4YOR171C YNL208WP40159 199 aaKnown RBP2.48□□□□□ -2.01
LCB4YOR171C YJR085CP47131 105 aaKnown RBP2.48□□□□□ -2.01
LCB4YOR171C RAF1Q06891 181 aa2.48□□□□□ -2.01
LCB4YOR171C HIR3P47171 1648 aa2.48□□□□□ -2.01
LCB4YOR171C MYO4P32492 1471 aa2.48□□□□□ -2.01
LCB4YOR171C ADH3P07246 375 aaKnown RBP2.48□□□□□ -2.01
LCB4YOR171C MSL1P40567 111 aaPredicted RBP2.48□□□□□ -2.01
LCB4YOR171C YFR035CP43608 114 aa2.48□□□□□ -2.01
LCB4YOR171C CLD1P53264 445 aa2.48□□□□□ -2.01
LCB4YOR171C HAL1Q01766 294 aa2.48□□□□□ -2.01
LCB4YOR171C YOS1Q3E834 85 aa2.48□□□□□ -2.01
LCB4YOR171C MIC10Q96VH5 97 aa2.48□□□□□ -2.01
LCB4YOR171C TY1B-BRQ12193 1756 aa2.47□□□□□ -2.01
LCB4YOR171C YAR068WP39564 161 aa2.47□□□□□ -2.01
LCB4YOR171C YFL067WP43537 175 aa2.47□□□□□ -2.01
LCB4YOR171C YFL065CP43539 102 aa2.47□□□□□ -2.01
LCB4YOR171C NCA3P46955 337 aa2.47□□□□□ -2.01
LCB4YOR171C MPC1P53157 130 aaKnown RBP2.47□□□□□ -2.01
LCB4YOR171C YMR244WQ04018 355 aa2.47□□□□□ -2.01
LCB4YOR171C PIN3Q06449 215 aa2.47□□□□□ -2.01
LCB4YOR171C YPR203WQ08994 102 aa2.47□□□□□ -2.01
LCB4YOR171C SEC7P11075 2009 aaKnown RBP2.47□□□□□ -2.01
LCB4YOR171C HAP1P0CE41 1502 aa2.46□□□□□ -2.02
LCB4YOR171C SIN3P22579 1536 aa2.46□□□□□ -2.02
LCB4YOR171C PHO88P38264 188 aaPredicted RBP2.46□□□□□ -2.02
LCB4YOR171C YHL042WP38729 150 aa2.46□□□□□ -2.02
LCB4YOR171C CYB5P40312 120 aa2.46□□□□□ -2.02
LCB4YOR171C PIR5P46999 287 aa2.46□□□□□ -2.02
LCB4YOR171C BNS1P50084 137 aa2.46□□□□□ -2.02
LCB4YOR171C YDR274CP87283 123 aa2.46□□□□□ -2.02
LCB4YOR171C ATP20Q12233 115 aa2.46□□□□□ -2.02
LCB4YOR171C SMT3Q12306 101 aaKnown RBP2.46□□□□□ -2.02
LCB4YOR171C JID1Q12350 301 aa2.46□□□□□ -2.02
LCB4YOR171C RPL21BQ12672 160 aaKnown RBP2.46□□□□□ -2.02
LCB4YOR171C COA6Q3E846 104 aa2.46□□□□□ -2.02
LCB4YOR171C YLR365WQ7LIF2 110 aa2.46□□□□□ -2.02
LCB4YOR171C ODC2Q99297 307 aa2.46□□□□□ -2.02
LCB4YOR171C MON2P48563 1636 aaPredicted RBP2.46□□□□□ -2.02
LCB4YOR171C SSS1P35179 80 aa2.45□□□□□ -2.02
LCB4YOR171C EMC5P40540 141 aa2.45□□□□□ -2.02
LCB4YOR171C CWP2P43497 92 aa2.45□□□□□ -2.02
LCB4YOR171C KNH1P50112 268 aa2.45□□□□□ -2.02
LCB4YOR171C CRH1P53301 507 aa2.45□□□□□ -2.02
LCB4YOR171C YNR064CP53750 290 aa2.45□□□□□ -2.02
LCB4YOR171C CSI2Q08054 341 aa2.45□□□□□ -2.02
LCB4YOR171C YPL247CQ12523 523 aa2.45□□□□□ -2.02
LCB4YOR171C TIM9O74700 87 aa2.45□□□□□ -2.02
LCB4YOR171C MAK31P23059 88 aa2.45□□□□□ -2.02
LCB4YOR171C MIG1P27705 504 aa2.45□□□□□ -2.02
LCB4YOR171C YKL044WP36092 106 aa2.45□□□□□ -2.02
LCB4YOR171C GPI18P38211 433 aa2.45□□□□□ -2.02
LCB4YOR171C SNF11P38956 169 aa2.45□□□□□ -2.02
LCB4YOR171C ATG18P43601 500 aa2.45□□□□□ -2.02
LCB4YOR171C SNN1P48232 102 aa2.45□□□□□ -2.02
LCB4YOR171C RPL21AQ02753 160 aaKnown RBP2.45□□□□□ -2.02
LCB4YOR171C MRPS8Q03799 155 aa2.45□□□□□ -2.02
LCB4YOR171C PBA1Q05778 276 aa2.45□□□□□ -2.02
LCB4YOR171C SWR1Q05471 1514 aa2.44□□□□□ -2.02
LCB4YOR171C PAI3P01094 68 aa2.44□□□□□ -2.02
LCB4YOR171C SWD3P38123 315 aa2.44□□□□□ -2.02
LCB4YOR171C UMP1P38293 148 aa2.44□□□□□ -2.02
LCB4YOR171C FLX1P40464 311 aa2.44□□□□□ -2.02
LCB4YOR171C LIP1Q03579 150 aa2.44□□□□□ -2.02
LCB4YOR171C GPI19Q04082 140 aa2.44□□□□□ -2.02
LCB4YOR171C YOR385WQ08909 290 aa2.44□□□□□ -2.02
LCB4YOR171C PRM3Q08931 133 aa2.44□□□□□ -2.02
LCB4YOR171C BNI1P41832 1953 aa2.44□□□□□ -2.02
LCB4YOR171C SRB8P25648 1427 aa2.44□□□□□ -2.02
LCB4YOR171C NUP159P40477 1460 aa2.44□□□□□ -2.02
LCB4YOR171C SSK2P53599 1579 aa2.44□□□□□ -2.02
LCB4YOR171C YCR085WP25650 117 aa2.43□□□□□ -2.02
LCB4YOR171C YBL059WP34224 193 aa2.43□□□□□ -2.02
LCB4YOR171C YHL018WP38744 120 aaPredicted RBP2.43□□□□□ -2.02
LCB4YOR171C CTR2P38865 189 aa2.43□□□□□ -2.02
LCB4YOR171C TDA2P40045 126 aa2.43□□□□□ -2.02
LCB4YOR171C ARC15P40518 154 aaRIP-Chip data2.43□□□□□ -2.02not detected
LCB4YOR171C YPI1P43587 155 aa2.43□□□□□ -2.02
LCB4YOR171C DSK2P48510 373 aa2.43□□□□□ -2.02
LCB4YOR171C CAX4P53223 239 aa2.43□□□□□ -2.02
LCB4YOR171C RIM9Q04734 239 aa2.43□□□□□ -2.02
LCB4YOR171C SCS22Q6Q595 175 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms