RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	RPS8A	P0CX39	200 aa	Known RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	RPS8B	P0CX40	200 aa	Known RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	SSS1	P35179	80 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	TMA19	P35691	167 aa	Known RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	LSM2	P38203	95 aa	Known RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	IRC22	P40006	225 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	EDC2	P40023	145 aa	Predicted RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	MPM1	P40364	252 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	YJL218W	P40892	196 aa	Known RBP	2.7	□□□□□ -1.98
VAM10	YOR068C	REE1	P40893	198 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	EAF6	P47128	113 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	YFR032C-B	Q8TGU2	87 aa		2.7	□□□□□ -1.98
VAM10	YOR068C	ECM12	O13529	151 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	YGL010W	P25338	174 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	IMP1	P28627	190 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
VAM10	YOR068C	PAM17	P36147	197 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	MRPL11	P36521	249 aa	Predicted RBP	2.69	□□□□□ -1.98
VAM10	YOR068C	SMP1	P38128	452 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	CCS1	P40202	249 aa	Known RBP	2.69	□□□□□ -1.98
VAM10	YOR068C	SKI6	P46948	246 aa	Predicted RBP	2.69	□□□□□ -1.98
VAM10	YOR068C	SNN1	P48232	102 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	SDS23	P53172	527 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	SMD1	Q02260	146 aa	Predicted RBP	2.69	□□□□□ -1.98
VAM10	YOR068C	UPS3	Q04006	179 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	LPP1	Q04396	274 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	SPG3	Q04398	127 aa	Predicted RBP	2.69	□□□□□ -1.98
VAM10	YOR068C	RAF1	Q06891	181 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	YPL278C	Q08990	100 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	YDR029W	Q12111	104 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	YML100W-A	Q8TGT0	57 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	NUP159	P40477	1460 aa		2.69	□□□□□ -1.98
VAM10	YOR068C	ESP1	Q03018	1630 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	RAS2	P01120	322 aa	Known RBP	2.68	□□□□□ -1.98
VAM10	YOR068C	INO4	P13902	151 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	GPX1	P36014	167 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	MSL1	P40567	111 aa	Predicted RBP	2.68	□□□□□ -1.98
VAM10	YOR068C	RRT7	Q07829	113 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	YOL014W	Q08110	124 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	ATG5	Q12380	294 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	YOR020W-A	Q3E824	90 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	KSH1	Q8TGJ3	72 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	BPT1	P14772	1559 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	YRF1-2	P40105	1681 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	UTP10	P42945	1769 aa	Known RBP	2.68	□□□□□ -1.98
VAM10	YOR068C	NUP170	P38181	1502 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	STU1	P38198	1513 aa		2.68	□□□□□ -1.98
VAM10	YOR068C	YHR139C-A	O13536	103 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	RPS14A	P06367	137 aa	Known RBP	2.67	□□□□□ -1.98
VAM10	YOR068C	ADH3	P07246	375 aa	Known RBP	2.67	□□□□□ -1.98
VAM10	YOR068C	BET1	P22804	142 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	PHO89	P38361	574 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	RPS14B	P39516	138 aa	Known RBP	2.67	□□□□□ -1.98
VAM10	YOR068C	ATG18	P43601	500 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	BNS1	P50084	137 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	CUE4	Q04201	117 aa	Predicted RBP	2.67	□□□□□ -1.98
VAM10	YOR068C	YMR252C	Q04814	134 aa		2.67	□□□□□ -1.98
VAM10	YOR068C	YPR174C	Q06616	221 aa	Predicted RBP	2.67	□□□□□ -1.98
VAM10	YOR068C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.66	□□□□□ -1.98
VAM10	YOR068C	URA5	P13298	226 aa	Known RBP	2.66	□□□□□ -1.98
VAM10	YOR068C	UBC4	P15731	148 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	OM14	P38325	134 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	CYB5	P40312	120 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	YFL065C	P43539	102 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	ERG25	P53045	309 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
VAM10	YOR068C	ADD37	Q03233	198 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	YPR203W	Q08994	102 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	ULS1	Q08562	1619 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	IRC20	Q06554	1556 aa		2.66	□□□□□ -1.98
VAM10	YOR068C	POL1	P13382	1468 aa		2.65	□□□□□ -1.98
VAM10	YOR068C	SEC7	P11075	2009 aa	Known RBP	2.65	□□□□□ -1.99
VAM10	YOR068C	NOP1	P15646	327 aa	Known RBP	2.65	□□□□□ -1.99
VAM10	YOR068C	NRG2	P38082	220 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	SWD3	P38123	315 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	YER134C	P40081	178 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	CAX4	P53223	239 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	MIM1	Q08176	113 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	PRM3	Q08931	133 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	YPR011C	Q12251	326 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	RPL21B	Q12672	160 aa	Known RBP	2.65	□□□□□ -1.99
VAM10	YOR068C	DFM1	Q12743	341 aa	Known RBP	2.65	□□□□□ -1.99
VAM10	YOR068C	YOS1	Q3E834	85 aa		2.65	□□□□□ -1.99
VAM10	YOR068C	SPT6	P23615	1451 aa	Known RBP	2.65	□□□□□ -1.99
VAM10	YOR068C	ROM2	P51862	1356 aa	Known RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	POR1	P04840	283 aa	Known RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	MDH2	P22133	377 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	YCR050C	P25630	102 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	YCR085W	P25650	117 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	ERG2	P32352	222 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	RPA12	P32529	125 aa	Known RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	PHO88	P38264	188 aa	Predicted RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	YHL018W	P38744	120 aa	Predicted RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	MIG3	P39943	394 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	NSA2	P40078	261 aa	Known RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	YFL019C	P43576	117 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	YGL262W	P53054	175 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	THG1	P53215	237 aa	Known RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	RSM19	P53733	91 aa	Predicted RBP	2.64	□□□□□ -1.99
VAM10	YOR068C	HAL1	Q01766	294 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 154.7 ms