RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C CGR1P53188 120 aa-0.63□□□□□ -2.51
VPS20YMR077C TIM11P81449 96 aaPredicted RBP-0.63□□□□□ -2.51
VPS20YMR077C YDR102CQ03864 110 aa-0.63□□□□□ -2.51
VPS20YMR077C JIP3O13555 125 aa-0.64□□□□□ -2.51
VPS20YMR077C IPI1P38803 334 aaPredicted RBP-0.64□□□□□ -2.51
VPS20YMR077C EST3Q03096 181 aa-0.64□□□□□ -2.51
VPS20YMR077C YPR153WQ06537 140 aa-0.64□□□□□ -2.51
VPS20YMR077C YET3Q07451 203 aa-0.64□□□□□ -2.51
VPS20YMR077C MYO1P08964 1928 aa-0.65□□□□□ -2.51
VPS20YMR077C IRC19Q07843 230 aa-0.65□□□□□ -2.51
VPS20YMR077C FMP27Q06179 2628 aa-0.66□□□□□ -2.51
VPS20YMR077C BNI1P41832 1953 aa-0.66□□□□□ -2.51
VPS20YMR077C FAS2P19097 1887 aaKnown RBP-0.66□□□□□ -2.52
VPS20YMR077C GSC2P40989 1895 aa-0.66□□□□□ -2.52
VPS20YMR077C NHP6AP11632 93 aaKnown RBP-0.66□□□□□ -2.52
VPS20YMR077C MRS4P23500 304 aa-0.66□□□□□ -2.52
VPS20YMR077C YMR122CQ03879 124 aa-0.66□□□□□ -2.52
VPS20YMR077C RFU1Q08003 200 aa-0.66□□□□□ -2.52
VPS20YMR077C YLR046CQ12253 270 aa-0.66□□□□□ -2.52
VPS20YMR077C DDR48P18899 430 aaKnown RBP-0.67□□□□□ -2.52
VPS20YMR077C TRR1P29509 319 aaKnown RBP-0.67□□□□□ -2.52
VPS20YMR077C FES1P38260 290 aa-0.67□□□□□ -2.52
VPS20YMR077C GRE1Q08969 168 aa-0.67□□□□□ -2.52
VPS20YMR077C ATP5P09457 212 aa-0.68□□□□□ -2.52
VPS20YMR077C PLP1Q04004 230 aa-0.68□□□□□ -2.52
VPS20YMR077C CDC39P25655 2108 aaKnown RBP-0.68□□□□□ -2.52
VPS20YMR077C SRP21P32342 167 aa-0.69□□□□□ -2.52
VPS20YMR077C EMC4P53073 190 aa-0.69□□□□□ -2.52
VPS20YMR077C MHF1Q3E835 90 aa-0.69□□□□□ -2.52
VPS20YMR077C KTI11Q3E840 82 aa-0.69□□□□□ -2.52
VPS20YMR077C YBR013CP38215 129 aa-0.7□□□□□ -2.52
VPS20YMR077C LST8P41318 303 aa-0.7□□□□□ -2.52
VPS20YMR077C HSK3P69852 69 aa-0.7□□□□□ -2.52
VPS20YMR077C COA4Q05809 96 aa-0.7□□□□□ -2.52
VPS20YMR077C MRPL24P36525 258 aaPredicted RBP-0.71□□□□□ -2.52
VPS20YMR077C GPI2P46961 280 aa-0.71□□□□□ -2.52
VPS20YMR077C YNL140CP53910 189 aa-0.71□□□□□ -2.52
VPS20YMR077C COX5BP00425 151 aa-0.72□□□□□ -2.52
VPS20YMR077C AUA1P32450 94 aa-0.72□□□□□ -2.52
VPS20YMR077C YGL193CP53097 103 aa-0.72□□□□□ -2.52
VPS20YMR077C HUT1Q12520 339 aa-0.72□□□□□ -2.52
VPS20YMR077C CMD1P06787 147 aaKnown RBP-0.73□□□□□ -2.53
VPS20YMR077C RAD51P25454 400 aa-0.73□□□□□ -2.53
VPS20YMR077C MIC27P50945 234 aa-0.73□□□□□ -2.53
VPS20YMR077C ORM1P53224 222 aa-0.73□□□□□ -2.53
VPS20YMR077C YNL019CP53975 284 aa-0.73□□□□□ -2.53
VPS20YMR077C YLR050CQ12155 161 aaKnown RBP-0.73□□□□□ -2.53
VPS20YMR077C SAC3P46674 1301 aa-0.73□□□□□ -2.53
VPS20YMR077C NMT1P14743 455 aa-0.74□□□□□ -2.53
VPS20YMR077C ATP19P81451 68 aa-0.74□□□□□ -2.53
VPS20YMR077C TMA20P89886 181 aaPredicted RBP-0.74□□□□□ -2.53
VPS20YMR077C YLR194CQ05777 254 aa-0.74□□□□□ -2.53
VPS20YMR077C YHR213WP0CI67 198 aa-0.75□□□□□ -2.53
VPS20YMR077C ATP7P30902 174 aa-0.75□□□□□ -2.53
VPS20YMR077C POR2P40478 281 aa-0.75□□□□□ -2.53
VPS20YMR077C FIP1P45976 327 aa-0.75□□□□□ -2.53
VPS20YMR077C YGL101WP53144 215 aa-0.75□□□□□ -2.53
VPS20YMR077C CWC21Q03375 135 aaKnown RBP-0.75□□□□□ -2.53
VPS20YMR077C FUN14P18411 198 aa-0.76□□□□□ -2.53
VPS20YMR077C AIM4P38305 123 aaPredicted RBP-0.76□□□□□ -2.53
VPS20YMR077C YIP3P53633 176 aa-0.76□□□□□ -2.53
VPS20YMR077C LSM3P57743 89 aaKnown RBP-0.76□□□□□ -2.53
VPS20YMR077C UBI4P0CG63 381 aaKnown RBP-0.77□□□□□ -2.53
VPS20YMR077C RPL30P14120 105 aaKnown RBP-0.77□□□□□ -2.53
VPS20YMR077C ANB1P19211 157 aa-0.77□□□□□ -2.53
VPS20YMR077C RME1P32338 300 aaKnown RBP-0.77□□□□□ -2.53
VPS20YMR077C SRP14P38985 146 aa-0.77□□□□□ -2.53
VPS20YMR077C YDR010CQ12426 110 aa-0.77□□□□□ -2.53
VPS20YMR077C SCS22Q6Q595 175 aa-0.77□□□□□ -2.53
VPS20YMR077C RPL40AP0CH08 128 aaKnown RBP-0.78□□□□□ -2.53
VPS20YMR077C RPL40BP0CH09 128 aaKnown RBP-0.78□□□□□ -2.53
VPS20YMR077C SEC72P39742 193 aaKnown RBP-0.78□□□□□ -2.53
VPS20YMR077C YFR035CP43608 114 aa-0.78□□□□□ -2.53
VPS20YMR077C YJR128WP47162 119 aa-0.78□□□□□ -2.53
VPS20YMR077C VMA10P48836 114 aaKnown RBP-0.78□□□□□ -2.53
VPS20YMR077C RRT7Q07829 113 aa-0.78□□□□□ -2.53
VPS20YMR077C POL2P21951 2222 aaKnown RBP-0.79□□□□□ -2.54
VPS20YMR077C TOR2P32600 2474 aaKnown RBP-0.79□□□□□ -2.54
VPS20YMR077C MRPL31P14063 131 aaPredicted RBP-0.79□□□□□ -2.54
VPS20YMR077C FYV5P25585 152 aa-0.79□□□□□ -2.54
VPS20YMR077C UTP11P34247 250 aaPredicted RBP-0.79□□□□□ -2.54
VPS20YMR077C YJL218WP40892 196 aaKnown RBP-0.79□□□□□ -2.54
VPS20YMR077C DYN1P36022 4092 aa-0.79□□□□□ -2.54
VPS20YMR077C TY1B-HO13535 1793 aa-0.8□□□□□ -2.54
VPS20YMR077C YER121WP40076 114 aa-0.8□□□□□ -2.54
VPS20YMR077C DLS1P40366 167 aa-0.8□□□□□ -2.54
VPS20YMR077C RDI1Q12434 202 aa-0.8□□□□□ -2.54
VPS20YMR077C GCN1P33892 2672 aaKnown RBP-0.81□□□□□ -2.54
VPS20YMR077C YCL001W-AP87012 153 aa-0.81□□□□□ -2.54
VPS20YMR077C TEL1P38110 2787 aa-0.81□□□□□ -2.54
VPS20YMR077C YSF3P0C074 85 aaPredicted RBP-0.82□□□□□ -2.54
VPS20YMR077C YPD1Q07688 167 aa-0.82□□□□□ -2.54
VPS20YMR077C BRR2P32639 2163 aaKnown RBP-0.82□□□□□ -2.54
VPS20YMR077C NUM1Q00402 2748 aa-0.83□□□□□ -2.54
VPS20YMR077C RPS1BP23248 255 aaKnown RBP-0.83□□□□□ -2.54
VPS20YMR077C YER181CP40097 107 aa-0.83□□□□□ -2.54
VPS20YMR077C YPR202WQ08993 238 aa-0.83□□□□□ -2.54
VPS20YMR077C YOL164W-AQ3E7A5 60 aa-0.83□□□□□ -2.54
VPS20YMR077C TY4B-JP47024 1803 aa-0.83□□□□□ -2.54
VPS20YMR077C YPR117WQ06116 2489 aa-0.83□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms