RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C IML3P38265 245 aa6.18□□□□□ -1.42
AFG2YLR397C CDH1P53197 566 aa6.18□□□□□ -1.42
AFG2YLR397C ECM12O13529 151 aa6.17□□□□□ -1.42
AFG2YLR397C NRG2P38082 220 aa6.17□□□□□ -1.42
AFG2YLR397C HUA1P40325 198 aa6.17□□□□□ -1.42
AFG2YLR397C MTC3P53077 123 aa6.17□□□□□ -1.42
AFG2YLR397C SDS23P53172 527 aa6.17□□□□□ -1.42
AFG2YLR397C RDL2Q08742 149 aaKnown RBP6.17□□□□□ -1.42
AFG2YLR397C SMT3Q12306 101 aaKnown RBP6.17□□□□□ -1.42
AFG2YLR397C GAL2P13181 574 aa6.17□□□□□ -1.42
AFG2YLR397C MID2P36027 376 aa6.17□□□□□ -1.42
AFG2YLR397C YIL014C-AQ02598 104 aa6.17□□□□□ -1.42
AFG2YLR397C YPL062WQ02781 134 aa6.17□□□□□ -1.42
AFG2YLR397C MCH4Q08268 501 aa6.17□□□□□ -1.42
AFG2YLR397C KRE1P17260 313 aa6.16□□□□□ -1.42
AFG2YLR397C RPB7P34087 171 aa6.16□□□□□ -1.42
AFG2YLR397C PRS4P38063 326 aaPredicted RBP6.16□□□□□ -1.42
AFG2YLR397C YEL068CP39977 110 aa6.16□□□□□ -1.42
AFG2YLR397C YFR045WP43617 309 aa6.16□□□□□ -1.42
AFG2YLR397C YMR007WQ03675 126 aa6.16□□□□□ -1.42
AFG2YLR397C RAV2Q03956 351 aa6.16□□□□□ -1.42
AFG2YLR397C HPA2Q06592 156 aa6.16□□□□□ -1.42
AFG2YLR397C DAD1Q12248 94 aa6.16□□□□□ -1.42
AFG2YLR397C DFG10P40526 253 aa6.16□□□□□ -1.42
AFG2YLR397C SBH1P52870 82 aa6.16□□□□□ -1.42
AFG2YLR397C YNL143CP53908 130 aa6.16□□□□□ -1.42
AFG2YLR397C YPT10P38146 199 aa6.15□□□□□ -1.42
AFG2YLR397C GON7P46984 123 aa6.15□□□□□ -1.42
AFG2YLR397C CAX4P53223 239 aa6.15□□□□□ -1.42
AFG2YLR397C SNP1Q00916 300 aaPredicted RBP6.15□□□□□ -1.42
AFG2YLR397C ERG2P32352 222 aa6.15□□□□□ -1.43
AFG2YLR397C APQ12P40532 138 aa6.15□□□□□ -1.43
AFG2YLR397C HPF1Q05164 967 aa6.15□□□□□ -1.43
AFG2YLR397C FUB1P25659 250 aa6.14□□□□□ -1.43
AFG2YLR397C TIF34P40217 347 aaKnown RBP6.14□□□□□ -1.43
AFG2YLR397C YLR296WQ05898 108 aa6.14□□□□□ -1.43
AFG2YLR397C YOR292CQ08743 309 aa6.14□□□□□ -1.43
AFG2YLR397C YCL021W-AQ96VH3 125 aa6.14□□□□□ -1.43
AFG2YLR397C MDM10P18409 493 aa6.14□□□□□ -1.43
AFG2YLR397C SFT2P38166 215 aa6.14□□□□□ -1.43
AFG2YLR397C YNL208WP40159 199 aaKnown RBP6.14□□□□□ -1.43
AFG2YLR397C GPI2P46961 280 aa6.14□□□□□ -1.43
AFG2YLR397C BRP1P53194 125 aa6.14□□□□□ -1.43
AFG2YLR397C GEP3Q08622 556 aa6.14□□□□□ -1.43
AFG2YLR397C HEM4P06174 275 aa6.13□□□□□ -1.43
AFG2YLR397C RPS2P25443 254 aaKnown RBP6.13□□□□□ -1.43
AFG2YLR397C MRPS5P33759 307 aa6.13□□□□□ -1.43
AFG2YLR397C VPS55P47111 140 aa6.13□□□□□ -1.43
AFG2YLR397C MIX17Q03667 156 aa6.13□□□□□ -1.43
AFG2YLR397C YMR103CQ04436 120 aa6.13□□□□□ -1.43
AFG2YLR397C YMR317WQ04893 1140 aa6.13□□□□□ -1.43
AFG2YLR397C YPS3Q12303 508 aa6.13□□□□□ -1.43
AFG2YLR397C YLR302CO13544 120 aa6.13□□□□□ -1.43
AFG2YLR397C TOM40P23644 387 aaKnown RBP6.13□□□□□ -1.43
AFG2YLR397C CPD1P53314 239 aa6.13□□□□□ -1.43
AFG2YLR397C MIM1Q08176 113 aa6.13□□□□□ -1.43
AFG2YLR397C HNT3Q08702 217 aa6.13□□□□□ -1.43
AFG2YLR397C RFM1Q12192 310 aa6.13□□□□□ -1.43
AFG2YLR397C RPS21BQ3E754 87 aaKnown RBP6.13□□□□□ -1.43
AFG2YLR397C TIM17P39515 158 aa6.12□□□□□ -1.43
AFG2YLR397C RPS22BQ3E7Y3 130 aaKnown RBP6.12□□□□□ -1.43
AFG2YLR397C YJR115WP47152 169 aa6.11□□□□□ -1.43
AFG2YLR397C YNR064CP53750 290 aa6.11□□□□□ -1.43
AFG2YLR397C YLR152CP54072 576 aa6.11□□□□□ -1.43
AFG2YLR397C RPL23AP0CX41 137 aaKnown RBP6.11□□□□□ -1.43
AFG2YLR397C RPL23BP0CX42 137 aaKnown RBP6.11□□□□□ -1.43
AFG2YLR397C YCR050CP25630 102 aa6.11□□□□□ -1.43
AFG2YLR397C YPS1P32329 569 aa6.11□□□□□ -1.43
AFG2YLR397C MST28P39552 234 aa6.11□□□□□ -1.43
AFG2YLR397C CUP9P41817 306 aa6.11□□□□□ -1.43
AFG2YLR397C YGL118CP53132 145 aa6.11□□□□□ -1.43
AFG2YLR397C HSK3P69852 69 aa6.11□□□□□ -1.43
AFG2YLR397C COF1Q03048 143 aaKnown RBP6.11□□□□□ -1.43
AFG2YLR397C INO2P26798 304 aa6.1□□□□□ -1.43
AFG2YLR397C GEP7P53171 287 aa6.1□□□□□ -1.43
AFG2YLR397C MOT3P54785 490 aaKnown RBP6.1□□□□□ -1.43
AFG2YLR397C IRC25Q07951 179 aa6.1□□□□□ -1.43
AFG2YLR397C CYR1P08678 2026 aaKnown RBP6.1□□□□□ -1.43
AFG2YLR397C RPS26AP39938 119 aaKnown RBP6.1□□□□□ -1.43
AFG2YLR397C RPS26BP39939 119 aaKnown RBP6.1□□□□□ -1.43
AFG2YLR397C YGR269WP40326 108 aa6.1□□□□□ -1.43
AFG2YLR397C IST3P40565 148 aaPredicted RBP6.1□□□□□ -1.43
AFG2YLR397C HST4P53688 370 aa6.1□□□□□ -1.43
AFG2YLR397C YFL041W-AQ3E817 63 aa6.1□□□□□ -1.43
AFG2YLR397C RAD6P06104 172 aa6.09□□□□□ -1.43
AFG2YLR397C RPL2AP0CX45 254 aaKnown RBP6.09□□□□□ -1.43
AFG2YLR397C RPL2BP0CX46 254 aaKnown RBP6.09□□□□□ -1.43
AFG2YLR397C YMR31P19955 123 aa6.09□□□□□ -1.43
AFG2YLR397C DSE2P38844 325 aa6.09□□□□□ -1.43
AFG2YLR397C LST8P41318 303 aa6.09□□□□□ -1.43
AFG2YLR397C DSK2P48510 373 aa6.09□□□□□ -1.43
AFG2YLR397C API2Q04413 109 aa6.09□□□□□ -1.43
AFG2YLR397C ERV1P27882 189 aa6.09□□□□□ -1.43
AFG2YLR397C YRA2P36036 203 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
AFG2YLR397C YGR219WP53307 113 aa6.09□□□□□ -1.43
AFG2YLR397C YHM2Q04013 314 aa6.09□□□□□ -1.43
AFG2YLR397C UPS1Q05776 175 aa6.09□□□□□ -1.43
AFG2YLR397C GRX8Q05926 109 aa6.09□□□□□ -1.43
AFG2YLR397C RPS22AP0C0W1 130 aaKnown RBP6.08□□□□□ -1.44
AFG2YLR397C REC114P32841 428 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms