RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W YMR226CQ05016 267 aaKnown RBP1.54□□□□□ -2.16
CST9YLR394W BRX1Q08235 291 aaKnown RBP1.54□□□□□ -2.16
CST9YLR394W YOR343CQ12484 108 aa1.54□□□□□ -2.16
CST9YLR394W RPL39P04650 51 aa1.53□□□□□ -2.16
CST9YLR394W RPL27AP0C2H6 136 aaKnown RBP1.53□□□□□ -2.16
CST9YLR394W URA5P13298 226 aaKnown RBP1.53□□□□□ -2.16
CST9YLR394W HSP30P25619 332 aa1.53□□□□□ -2.16
CST9YLR394W CLG1P35190 452 aa1.53□□□□□ -2.16
CST9YLR394W RPL13BP40212 199 aaKnown RBP1.53□□□□□ -2.16
CST9YLR394W VPS71Q03433 280 aa1.53□□□□□ -2.16
CST9YLR394W ANT1Q06497 328 aa1.53□□□□□ -2.16
CST9YLR394W RPL13AQ12690 199 aaPredicted RBP1.53□□□□□ -2.16
CST9YLR394W MHF1Q3E835 90 aa1.53□□□□□ -2.16
CST9YLR394W ATG40Q99325 256 aa1.53□□□□□ -2.16
CST9YLR394W YLR236CA0A023PZG4 107 aa1.52□□□□□ -2.17
CST9YLR394W RPL25P04456 142 aaKnown RBP1.52□□□□□ -2.17
CST9YLR394W SIR2P06700 562 aa1.52□□□□□ -2.17
CST9YLR394W YPK2P18961 677 aa1.52□□□□□ -2.17
CST9YLR394W MAG1P22134 296 aaKnown RBP1.52□□□□□ -2.17
CST9YLR394W YBR285WP38354 144 aa1.52□□□□□ -2.17
CST9YLR394W AIM25P47140 327 aa1.52□□□□□ -2.17
CST9YLR394W KNH1P50112 268 aa1.52□□□□□ -2.17
CST9YLR394W RCF2P53721 224 aa1.52□□□□□ -2.17
CST9YLR394W YDR476CQ03362 224 aa1.52□□□□□ -2.17
CST9YLR394W IRC19Q07843 230 aa1.52□□□□□ -2.17
CST9YLR394W YGR035W-AQ45U48 73 aa1.52□□□□□ -2.17
CST9YLR394W TIM12P32830 109 aa1.51□□□□□ -2.17
CST9YLR394W YBR032WP38223 100 aa1.51□□□□□ -2.17
CST9YLR394W TRM5P38793 499 aa1.51□□□□□ -2.17
CST9YLR394W RGI1P40043 161 aaPredicted RBP1.51□□□□□ -2.17
CST9YLR394W FLX1P40464 311 aa1.51□□□□□ -2.17
CST9YLR394W MPC3P53311 146 aa1.51□□□□□ -2.17
CST9YLR394W MRPS17Q03246 237 aaPredicted RBP1.51□□□□□ -2.17
CST9YLR394W YOR214CQ12282 236 aa1.51□□□□□ -2.17
CST9YLR394W QCR7P00128 127 aa1.5□□□□□ -2.17
CST9YLR394W RPS1BP23248 255 aaKnown RBP1.5□□□□□ -2.17
CST9YLR394W ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
CST9YLR394W ARC19P33204 171 aaKnown RBP1.5□□□□□ -2.17
CST9YLR394W TMA19P35691 167 aaKnown RBP1.5□□□□□ -2.17
CST9YLR394W SHE2P36068 246 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
CST9YLR394W CNB1P25296 175 aa1.49□□□□□ -2.17
CST9YLR394W YBR209WP38311 105 aa1.49□□□□□ -2.17
CST9YLR394W ERJ5P43613 295 aaPredicted RBP1.49□□□□□ -2.17
CST9YLR394W FIP1P45976 327 aa1.49□□□□□ -2.17
CST9YLR394W SAY1P53324 424 aa1.49□□□□□ -2.17
CST9YLR394W YNR064CP53750 290 aa1.49□□□□□ -2.17
CST9YLR394W ATG38Q05789 226 aaKnown RBP1.49□□□□□ -2.17
CST9YLR394W PRP11Q07350 266 aaPredicted RBP1.49□□□□□ -2.17
CST9YLR394W COX5BP00425 151 aa1.49□□□□□ -2.17
CST9YLR394W MRS1P07266 363 aa1.49□□□□□ -2.17
CST9YLR394W OCH1P31755 480 aa1.49□□□□□ -2.17
CST9YLR394W YRA2P36036 203 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
CST9YLR394W FIG1P38224 298 aa1.49□□□□□ -2.17
CST9YLR394W MTW1P39731 289 aa1.49□□□□□ -2.17
CST9YLR394W MPC1P53157 130 aaKnown RBP1.49□□□□□ -2.17
CST9YLR394W HNT1Q04344 158 aaKnown RBP1.49□□□□□ -2.17
CST9YLR394W RNH202Q05635 350 aa1.49□□□□□ -2.17
CST9YLR394W POR1P04840 283 aaKnown RBP1.48□□□□□ -2.17
CST9YLR394W QCR8P08525 94 aa1.48□□□□□ -2.17
CST9YLR394W TFC1P32367 649 aa1.48□□□□□ -2.17
CST9YLR394W AUA1P32450 94 aa1.48□□□□□ -2.17
CST9YLR394W HPM1P40481 377 aa1.48□□□□□ -2.17
CST9YLR394W YGR201CP42936 225 aa1.48□□□□□ -2.17
CST9YLR394W YGL235WP53071 178 aa1.48□□□□□ -2.17
CST9YLR394W GEP7P53171 287 aa1.48□□□□□ -2.17
CST9YLR394W YPR127WQ06494 345 aa1.48□□□□□ -2.17
CST9YLR394W YMR105W-AQ8TGS8 64 aa1.48□□□□□ -2.17
CST9YLR394W CKS1P20486 150 aaKnown RBP1.47□□□□□ -2.17
CST9YLR394W SPO13P23624 291 aa1.47□□□□□ -2.17
CST9YLR394W RPC19P28000 142 aaKnown RBP1.47□□□□□ -2.17
CST9YLR394W GET1P53192 235 aa1.47□□□□□ -2.17
CST9YLR394W DML1Q03652 475 aa1.47□□□□□ -2.17
CST9YLR394W YDR391CQ04170 232 aa1.47□□□□□ -2.17
CST9YLR394W SEC11P15367 167 aa1.46□□□□□ -2.18
CST9YLR394W MPM1P40364 252 aa1.46□□□□□ -2.18
CST9YLR394W MMS2P53152 137 aa1.46□□□□□ -2.18
CST9YLR394W GIM3P53900 129 aa1.46□□□□□ -2.18
CST9YLR394W YDC1Q02896 317 aa1.46□□□□□ -2.18
CST9YLR394W RAD28Q12021 506 aa1.46□□□□□ -2.18
CST9YLR394W SPC3Q12133 184 aa1.46□□□□□ -2.18
CST9YLR394W FCY1Q12178 158 aa1.46□□□□□ -2.18
CST9YLR394W ODC2Q99297 307 aa1.46□□□□□ -2.18
CST9YLR394W MBF1O14467 151 aaKnown RBP1.45□□□□□ -2.18
CST9YLR394W YEA4P40004 342 aa1.45□□□□□ -2.18
CST9YLR394W YER076CP40049 302 aa1.45□□□□□ -2.18
CST9YLR394W ARP3P47117 449 aaKnown RBP1.45□□□□□ -2.18
CST9YLR394W YJR111CP47148 283 aaKnown RBP1.45□□□□□ -2.18
CST9YLR394W YHR212W-AP0CX91 67 aa1.44□□□□□ -2.18
CST9YLR394W NUF2P33895 451 aa1.44□□□□□ -2.18
CST9YLR394W PAN3P36102 679 aaPredicted RBP1.44□□□□□ -2.18
CST9YLR394W SKI6P46948 246 aaPredicted RBP1.44□□□□□ -2.18
CST9YLR394W UBC12P52491 188 aa1.44□□□□□ -2.18
CST9YLR394W AIM36Q03798 255 aa1.44□□□□□ -2.18
CST9YLR394W GPI17Q04080 534 aa1.44□□□□□ -2.18
CST9YLR394W CUE4Q04201 117 aaPredicted RBP1.44□□□□□ -2.18
CST9YLR394W DYN3Q04949 312 aa1.44□□□□□ -2.18
CST9YLR394W DGA1Q08650 418 aa1.44□□□□□ -2.18
CST9YLR394W SER2P42941 309 aa1.43□□□□□ -2.18
CST9YLR394W YNL033WP53964 284 aa1.43□□□□□ -2.18
CST9YLR394W YNL019CP53975 284 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms