RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W PHO85P17157 305 aa2.87□□□□□ -1.95
LCB5YLR260W CKS1P20486 150 aaKnown RBP2.87□□□□□ -1.95
LCB5YLR260W RNP1P32385 249 aa2.87□□□□□ -1.95
LCB5YLR260W SNC2P33328 115 aa2.87□□□□□ -1.95
LCB5YLR260W BAT2P47176 376 aaKnown RBP2.87□□□□□ -1.95
LCB5YLR260W SDS23P53172 527 aa2.87□□□□□ -1.95
LCB5YLR260W YDR366CP87287 132 aa2.87□□□□□ -1.95
LCB5YLR260W ADD37Q03233 198 aa2.87□□□□□ -1.95
LCB5YLR260W ATX2Q12067 313 aa2.87□□□□□ -1.95
LCB5YLR260W TSC3Q3E790 80 aa2.87□□□□□ -1.95
LCB5YLR260W YBR298C-AQ8TGK4 73 aa2.87□□□□□ -1.95
LCB5YLR260W MAG1P22134 296 aaKnown RBP2.86□□□□□ -1.95
LCB5YLR260W EDC2P40023 145 aaPredicted RBP2.86□□□□□ -1.95
LCB5YLR260W DLS1P40366 167 aa2.86□□□□□ -1.95
LCB5YLR260W YIL012WP40551 113 aa2.86□□□□□ -1.95
LCB5YLR260W YJL213WP40896 331 aa2.86□□□□□ -1.95
LCB5YLR260W DIM1P41819 318 aaKnown RBP2.86□□□□□ -1.95
LCB5YLR260W DIG2Q03373 323 aaKnown RBP2.86□□□□□ -1.95
LCB5YLR260W NIP7Q08962 181 aaKnown RBP2.86□□□□□ -1.95
LCB5YLR260W YBL008W-AQ3E821 79 aa2.86□□□□□ -1.95
LCB5YLR260W RPN13O13563 156 aa2.86□□□□□ -1.95
LCB5YLR260W ATR1P13090 542 aa2.86□□□□□ -1.95
LCB5YLR260W CPR1P14832 162 aaKnown RBP2.86□□□□□ -1.95
LCB5YLR260W MRPL44P19956 98 aa2.86□□□□□ -1.95
LCB5YLR260W YER084WP40057 128 aa2.86□□□□□ -1.95
LCB5YLR260W DIE2P50076 525 aa2.86□□□□□ -1.95
LCB5YLR260W YGR039WP53225 103 aa2.86□□□□□ -1.95
LCB5YLR260W VPS71Q03433 280 aa2.86□□□□□ -1.95
LCB5YLR260W FSH2Q05015 223 aa2.86□□□□□ -1.95
LCB5YLR260W FCY1Q12178 158 aa2.86□□□□□ -1.95
LCB5YLR260W Q0255P03881 472 aa2.85□□□□□ -1.95
LCB5YLR260W IMP1P28627 190 aa2.85□□□□□ -1.95
LCB5YLR260W SMP1P38128 452 aa2.85□□□□□ -1.95
LCB5YLR260W YEA6P39953 335 aa2.85□□□□□ -1.95
LCB5YLR260W YIR035CP40579 254 aa2.85□□□□□ -1.95
LCB5YLR260W XPT1P47165 209 aa2.85□□□□□ -1.95
LCB5YLR260W ERV14P53173 138 aa2.85□□□□□ -1.95
LCB5YLR260W RCE1Q03530 315 aa2.85□□□□□ -1.95
LCB5YLR260W YLR118CQ12354 227 aa2.85□□□□□ -1.95
LCB5YLR260W TDA8Q6B2U8 126 aa2.85□□□□□ -1.95
LCB5YLR260W YFR032C-BQ8TGU2 87 aa2.85□□□□□ -1.95
LCB5YLR260W HHF1P02309 103 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W SPS2P08459 502 aa2.84□□□□□ -1.95
LCB5YLR260W RPL42AP0CX27 106 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W RPL42BP0CX28 106 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W YBL081WP38180 368 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W SNU13P39990 126 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W SPO73P40031 143 aa2.84□□□□□ -1.95
LCB5YLR260W YGL088WP53151 121 aa2.84□□□□□ -1.95
LCB5YLR260W SED1Q01589 338 aa2.84□□□□□ -1.95
LCB5YLR260W YPR063CQ12160 140 aa2.84□□□□□ -1.95
LCB5YLR260W FMP49A0A023PZB3 126 aa2.84□□□□□ -1.95
LCB5YLR260W REP2P03872 296 aa2.84□□□□□ -1.95
LCB5YLR260W STF2P16965 84 aa2.84□□□□□ -1.95
LCB5YLR260W LDS1P31379 325 aa2.84□□□□□ -1.95
LCB5YLR260W YKR070WP36151 352 aaKnown RBP2.84□□□□□ -1.95
LCB5YLR260W SFT1P43682 97 aa2.84□□□□□ -1.95
LCB5YLR260W FIP1P45976 327 aa2.84□□□□□ -1.95
LCB5YLR260W SIP18P50263 79 aa2.84□□□□□ -1.95
LCB5YLR260W ELP6Q04868 273 aa2.84□□□□□ -1.95
LCB5YLR260W YNL277W-AQ3E7Z0 62 aa2.84□□□□□ -1.95
LCB5YLR260W MHF1Q3E835 90 aa2.84□□□□□ -1.95
LCB5YLR260W RPS8AP0CX39 200 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W RPS8BP0CX40 200 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W TIR1P10863 254 aa2.83□□□□□ -1.96
LCB5YLR260W IRC22P40006 225 aa2.83□□□□□ -1.96
LCB5YLR260W TTI2P47168 421 aa2.83□□□□□ -1.96
LCB5YLR260W ALG9P53868 555 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W YDR415CQ04033 374 aaPredicted RBP2.83□□□□□ -1.96
LCB5YLR260W SHH3Q04487 196 aa2.83□□□□□ -1.96
LCB5YLR260W FIT3Q08907 204 aa2.83□□□□□ -1.96
LCB5YLR260W YPL162CQ12042 273 aa2.83□□□□□ -1.96
LCB5YLR260W YAL063C-AQ3E791 96 aa2.83□□□□□ -1.96
LCB5YLR260W RPL9AP05738 191 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W PFS2P42841 465 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W NSE4P43124 402 aa2.83□□□□□ -1.96
LCB5YLR260W RPL9BP51401 191 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W AIM11P87275 137 aa2.83□□□□□ -1.96
LCB5YLR260W LPP1Q04396 274 aa2.83□□□□□ -1.96
LCB5YLR260W GRH1Q04410 372 aaKnown RBP2.83□□□□□ -1.96
LCB5YLR260W BOL1Q3E793 110 aa2.83□□□□□ -1.96
LCB5YLR260W COX5BP00425 151 aa2.82□□□□□ -1.96
LCB5YLR260W TRP1P00912 224 aa2.82□□□□□ -1.96
LCB5YLR260W SRP21P32342 167 aa2.82□□□□□ -1.96
LCB5YLR260W YBR013CP38215 129 aa2.82□□□□□ -1.96
LCB5YLR260W ERV15P38312 142 aa2.82□□□□□ -1.96
LCB5YLR260W PRM5P40476 318 aa2.82□□□□□ -1.96
LCB5YLR260W NCA3P46955 337 aa2.82□□□□□ -1.96
LCB5YLR260W YJR085CP47131 105 aaKnown RBP2.82□□□□□ -1.96
LCB5YLR260W YMR099CQ03161 297 aaKnown RBP2.82□□□□□ -1.96
LCB5YLR260W FEX1Q08913 375 aa2.82□□□□□ -1.96
LCB5YLR260W YPS3Q12303 508 aa2.82□□□□□ -1.96
LCB5YLR260W IZH2Q12442 317 aa2.82□□□□□ -1.96
LCB5YLR260W YHR213W-AQ8TGT4 77 aa2.82□□□□□ -1.96
LCB5YLR260W DYN1P36022 4092 aa2.81□□□□□ -1.96
LCB5YLR260W SGA1P08019 549 aa2.81□□□□□ -1.96
LCB5YLR260W BGL2P15703 313 aaKnown RBP2.81□□□□□ -1.96
LCB5YLR260W HOT13P36078 116 aa2.81□□□□□ -1.96
LCB5YLR260W UTP30P36144 274 aaKnown RBP2.81□□□□□ -1.96
LCB5YLR260W YHR130CP38834 111 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms