RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W FIT2Q08906 153 aa4.01□□□□□ -1.77
SSP120YLR250W ISN1Q99312 450 aa4.01□□□□□ -1.77
SSP120YLR250W RPB3P16370 318 aaKnown RBP4□□□□□ -1.77
SSP120YLR250W AHT1P29589 182 aa4□□□□□ -1.77
SSP120YLR250W MRPL4P36517 319 aa4□□□□□ -1.77
SSP120YLR250W YGL117WP53133 265 aa4□□□□□ -1.77
SSP120YLR250W TMA23Q03525 211 aa4□□□□□ -1.77
SSP120YLR250W YPR145C-AQ2V2P0 78 aa4□□□□□ -1.77
SSP120YLR250W EMP24P32803 203 aaKnown RBP3.99□□□□□ -1.77
SSP120YLR250W YMR141CP40211 102 aa3.99□□□□□ -1.77
SSP120YLR250W TOM7P53507 60 aa3.99□□□□□ -1.77
SSP120YLR250W YLR179CQ06252 201 aaKnown RBP3.99□□□□□ -1.77
SSP120YLR250W LCL2Q08045 131 aa3.99□□□□□ -1.77
SSP120YLR250W YDR157WA0A023PZE8 133 aa3.98□□□□□ -1.77
SSP120YLR250W SAL1D6W196 494 aa3.98□□□□□ -1.77
SSP120YLR250W HTB2P02294 131 aa3.98□□□□□ -1.77
SSP120YLR250W MRP2P10663 115 aaPredicted RBP3.98□□□□□ -1.77
SSP120YLR250W ACB1P31787 87 aa3.98□□□□□ -1.77
SSP120YLR250W TRS20P38334 175 aa3.98□□□□□ -1.77
SSP120YLR250W PEX7P39108 375 aa3.98□□□□□ -1.77
SSP120YLR250W BER1Q06688 274 aaKnown RBP3.98□□□□□ -1.77
SSP120YLR250W QCR9P22289 66 aa3.97□□□□□ -1.77
SSP120YLR250W HSP12P22943 109 aaKnown RBP3.97□□□□□ -1.77
SSP120YLR250W SPI1P40092 148 aa3.97□□□□□ -1.77
SSP120YLR250W YPS5P53057 165 aa3.97□□□□□ -1.77
SSP120YLR250W ATP23P53722 227 aa3.97□□□□□ -1.77
SSP120YLR250W MRPL50P53724 139 aa3.97□□□□□ -1.77
SSP120YLR250W RAV2Q03956 351 aa3.97□□□□□ -1.77
SSP120YLR250W SDO1Q07953 250 aaKnown RBP3.97□□□□□ -1.77
SSP120YLR250W FCF2Q12035 217 aaPredicted RBP3.97□□□□□ -1.77
SSP120YLR250W YGL194C-AQ2V2P6 80 aa3.97□□□□□ -1.77
SSP120YLR250W YCR075W-AQ3E830 75 aa3.97□□□□□ -1.77
SSP120YLR250W VAR1P02381 398 aa3.96□□□□□ -1.78
SSP120YLR250W Q0255P03881 472 aa3.96□□□□□ -1.78
SSP120YLR250W ANB1P19211 157 aa3.96□□□□□ -1.78
SSP120YLR250W RPS0AP32905 252 aaKnown RBP3.96□□□□□ -1.78
SSP120YLR250W RRT13P40042 185 aa3.96□□□□□ -1.78
SSP120YLR250W TAD2P47058 250 aa3.96□□□□□ -1.78
SSP120YLR250W YJR096WP47137 282 aa3.96□□□□□ -1.78
SSP120YLR250W MRX11Q03079 207 aa3.96□□□□□ -1.78
SSP120YLR250W YOR015WQ12169 119 aa3.96□□□□□ -1.78
SSP120YLR250W YLR302CO13544 120 aa3.95□□□□□ -1.78
SSP120YLR250W IRC22P40006 225 aa3.95□□□□□ -1.78
SSP120YLR250W YNL200CP40165 246 aaKnown RBP3.95□□□□□ -1.78
SSP120YLR250W SNO1Q03144 224 aa3.95□□□□□ -1.78
SSP120YLR250W ATC1Q04005 294 aa3.95□□□□□ -1.78
SSP120YLR250W CRC1Q12289 327 aa3.95□□□□□ -1.78
SSP120YLR250W TMA17Q12513 150 aa3.95□□□□□ -1.78
SSP120YLR250W SAR1P20606 190 aaKnown RBP3.94□□□□□ -1.78
SSP120YLR250W YPT53P36019 220 aa3.94□□□□□ -1.78
SSP120YLR250W ELF1P36053 145 aa3.94□□□□□ -1.78
SSP120YLR250W YNR066CP53752 436 aa3.94□□□□□ -1.78
SSP120YLR250W YMR253CQ04835 414 aa3.94□□□□□ -1.78
SSP120YLR250W ATX2Q12067 313 aa3.94□□□□□ -1.78
SSP120YLR250W YLR125WQ12138 136 aa3.94□□□□□ -1.78
SSP120YLR250W MRS1P07266 363 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-LR4P0C2I8 440 aaKnown RBP3.93□□□□□ -1.78
SSP120YLR250W TY1A-DR6P0CX70 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-ER1P0CX71 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-LR2P0CX72 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-PLP0CX73 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-JR1P0CX74 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-LR3P0CX75 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-ML2P0CX76 440 aa3.93□□□□□ -1.78
SSP120YLR250W RPL16BP26785 198 aaKnown RBP3.93□□□□□ -1.78
SSP120YLR250W NPL6P32832 435 aa3.93□□□□□ -1.78
SSP120YLR250W NNK1P36003 928 aa3.93□□□□□ -1.78
SSP120YLR250W SIT1P39980 628 aa3.93□□□□□ -1.78
SSP120YLR250W RIB4P50861 169 aaPredicted RBP3.93□□□□□ -1.78
SSP120YLR250W CAF40P53829 373 aa3.93□□□□□ -1.78
SSP120YLR250W ADD37Q03233 198 aa3.93□□□□□ -1.78
SSP120YLR250W PBA1Q05778 276 aa3.93□□□□□ -1.78
SSP120YLR250W ANT1Q06497 328 aa3.93□□□□□ -1.78
SSP120YLR250W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SSP120YLR250W TY1A-GR1Q12085 440 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.93□□□□□ -1.78
SSP120YLR250W YLL066W-BQ8TGJ7 56 aa3.93□□□□□ -1.78
SSP120YLR250W TY1A-OLQ92392 440 aaKnown RBP3.93□□□□□ -1.78
SSP120YLR250W CUP2P15315 225 aa3.92□□□□□ -1.78
SSP120YLR250W CPT1P17898 393 aa3.92□□□□□ -1.78
SSP120YLR250W KRE9P39005 276 aa3.92□□□□□ -1.78
SSP120YLR250W YNL217WP40152 326 aa3.92□□□□□ -1.78
SSP120YLR250W YIL163CP40448 117 aa3.92□□□□□ -1.78
SSP120YLR250W POG1P40473 351 aa3.92□□□□□ -1.78
SSP120YLR250W YBR126W-AQ8TGU7 68 aa3.92□□□□□ -1.78
SSP120YLR250W RPL31BP0C2H9 113 aaKnown RBP3.91□□□□□ -1.78
SSP120YLR250W MAG1P22134 296 aaKnown RBP3.91□□□□□ -1.78
SSP120YLR250W MRPL20P22354 195 aaPredicted RBP3.91□□□□□ -1.78
SSP120YLR250W LOC1P43586 204 aaPredicted RBP3.91□□□□□ -1.78
SSP120YLR250W DAD4P69851 72 aa3.91□□□□□ -1.78
SSP120YLR250W MRPS17Q03246 237 aaPredicted RBP3.91□□□□□ -1.78
SSP120YLR250W COA4Q05809 96 aa3.91□□□□□ -1.78
SSP120YLR250W YGR240C-AQ3E786 66 aa3.91□□□□□ -1.78
SSP120YLR250W RRT15Q3E811 62 aa3.91□□□□□ -1.78
SSP120YLR250W RPL11AP0C0W9 174 aaKnown RBP3.9□□□□□ -1.79
SSP120YLR250W UBI4P0CG63 381 aaKnown RBP3.9□□□□□ -1.79
SSP120YLR250W RPL14AP36105 138 aaKnown RBP3.9□□□□□ -1.79
SSP120YLR250W YBR090CP38253 122 aa3.9□□□□□ -1.79
SSP120YLR250W RPL14BP38754 138 aaKnown RBP3.9□□□□□ -1.79
SSP120YLR250W YHR173CP38864 112 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms