RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	DML1	Q03652	475 aa		3.8	□□□□□ -1.8
SIS2	YKR072C	FSF1	Q12029	327 aa	Known RBP	3.8	□□□□□ -1.8
SIS2	YKR072C	YOL085C	Q99345	113 aa		3.8	□□□□□ -1.8
SIS2	YKR072C	HSP12	P22943	109 aa	Known RBP	3.79	□□□□□ -1.8
SIS2	YKR072C	YPT31	P38555	223 aa	Known RBP	3.79	□□□□□ -1.8
SIS2	YKR072C	YKR005C	Q02203	525 aa		3.79	□□□□□ -1.8
SIS2	YKR072C	MRPS8	Q03799	155 aa		3.79	□□□□□ -1.8
SIS2	YKR072C	GAL83	Q04739	417 aa		3.79	□□□□□ -1.8
SIS2	YKR072C	KTI11	Q3E840	82 aa		3.79	□□□□□ -1.8
SIS2	YKR072C	RSF2	P46974	1380 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	RAD6	P06104	172 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	YKR070W	P36151	352 aa	Known RBP	3.78	□□□□□ -1.8
SIS2	YKR072C	UMP1	P38293	148 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	NSA2	P40078	261 aa	Known RBP	3.78	□□□□□ -1.8
SIS2	YKR072C	YER188W	P40103	239 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	GVP36	P40531	326 aa	Known RBP	3.78	□□□□□ -1.8
SIS2	YKR072C	SBH1	P52870	82 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	EST3	Q03096	181 aa		3.78	□□□□□ -1.8
SIS2	YKR072C	RAD10	P06838	210 aa		3.78	□□□□□ -1.81
SIS2	YKR072C	FYV12	Q08559	129 aa		3.78	□□□□□ -1.81
SIS2	YKR072C	ATO3	Q12359	275 aa		3.78	□□□□□ -1.81
SIS2	YKR072C	SPS2	P08459	502 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	YOR062C	P36025	268 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	ETR1	P38071	380 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	ECO1	P43605	281 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	EMC4	P53073	190 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	YGR026W	P53217	278 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	FCF1	Q05498	189 aa	Predicted RBP	3.77	□□□□□ -1.81
SIS2	YKR072C	SYM1	Q06563	197 aa		3.77	□□□□□ -1.81
SIS2	YKR072C	ANB1	P19211	157 aa		3.76	□□□□□ -1.81
SIS2	YKR072C	YAE1	P47118	141 aa	Predicted RBP	3.76	□□□□□ -1.81
SIS2	YKR072C	SMD1	Q02260	146 aa	Predicted RBP	3.76	□□□□□ -1.81
SIS2	YKR072C	YER039C-A	P0CD97	72 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	YEL028W	P39989	153 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	GEP7	P53171	287 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	MRPS16	Q02608	121 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	ELC1	Q03071	99 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	YMR295C	Q03559	197 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	RNH202	Q05635	350 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	ADE6	P38972	1358 aa	Known RBP	3.75	□□□□□ -1.81
SIS2	YKR072C	AUS1	Q08409	1394 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	POR1	P04840	283 aa	Known RBP	3.75	□□□□□ -1.81
SIS2	YKR072C	KRE9	P39005	276 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	MOB1	P40484	314 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	CUP9	P41817	306 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	YDR102C	Q03864	110 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	ATP20	Q12233	115 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	HUT1	Q12520	339 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	YKL068W-A	Q3E826	78 aa		3.75	□□□□□ -1.81
SIS2	YKR072C	APC1	P53886	1748 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	CTR2	P38865	189 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	RPB11	P38902	120 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	SPC25	P40014	221 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	YNR062C	P53748	327 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	TVP18	Q04767	167 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	SAS5	Q99314	248 aa		3.74	□□□□□ -1.81
SIS2	YKR072C	RIM15	P43565	1770 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	VAR1	P02381	398 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	HAP2	P06774	265 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	YHR032W-A	P0C5N6	59 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	GPA2	P10823	449 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	YER135C	P40082	130 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	PHS1	P40857	217 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	GON7	P46984	123 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	ANT1	Q06497	328 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	RRT7	Q07829	113 aa		3.73	□□□□□ -1.81
SIS2	YKR072C	YGL230C	P53074	147 aa		3.72	□□□□□ -1.81
SIS2	YKR072C	SHH3	Q04487	196 aa		3.72	□□□□□ -1.81
SIS2	YKR072C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
SIS2	YKR072C	YLR042C	Q07990	161 aa		3.72	□□□□□ -1.81
SIS2	YKR072C	DDR48	P18899	430 aa	Known RBP	3.71	□□□□□ -1.81
SIS2	YKR072C	SFT2	P38166	215 aa		3.71	□□□□□ -1.81
SIS2	YKR072C	AIM18	P38884	321 aa		3.71	□□□□□ -1.81
SIS2	YKR072C	RIO2	P40160	425 aa	Known RBP	3.71	□□□□□ -1.81
SIS2	YKR072C	YFR045W	P43617	309 aa		3.71	□□□□□ -1.81
SIS2	YKR072C	SPG1	P50088	95 aa		3.71	□□□□□ -1.81
SIS2	YKR072C	MSW1	P04803	379 aa		3.71	□□□□□ -1.82
SIS2	YKR072C	RPS19A	P07280	144 aa	Known RBP	3.71	□□□□□ -1.82
SIS2	YKR072C	RPS19B	P07281	144 aa	Predicted RBP	3.71	□□□□□ -1.82
SIS2	YKR072C	MRS4	P23500	304 aa		3.71	□□□□□ -1.82
SIS2	YKR072C	MRPL15	P36523	253 aa		3.71	□□□□□ -1.82
SIS2	YKR072C	YNR064C	P53750	290 aa		3.71	□□□□□ -1.82
SIS2	YKR072C	RRT1	P38192	103 aa		3.7	□□□□□ -1.82
SIS2	YKR072C	EAF6	P47128	113 aa		3.7	□□□□□ -1.82
SIS2	YKR072C	DAD3	P69850	94 aa		3.7	□□□□□ -1.82
SIS2	YKR072C	FKS1	P38631	1876 aa	Known RBP	3.7	□□□□□ -1.82
SIS2	YKR072C	NOP1	P15646	327 aa	Known RBP	3.69	□□□□□ -1.82
SIS2	YKR072C	SEC59	P20048	519 aa		3.69	□□□□□ -1.82
SIS2	YKR072C	YKR032W	P36127	104 aa		3.69	□□□□□ -1.82
SIS2	YKR072C	YEL073C	P39974	107 aa		3.69	□□□□□ -1.82
SIS2	YKR072C	LIP1	Q03579	150 aa		3.69	□□□□□ -1.82
SIS2	YKR072C	OCA6	Q12454	224 aa		3.69	□□□□□ -1.82
SIS2	YKR072C	MPM1	P40364	252 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	GAT4	P40569	121 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	SMD3	P43321	101 aa	Known RBP	3.68	□□□□□ -1.82
SIS2	YKR072C	MPC3	P53311	146 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	GRX5	Q02784	150 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	YOR268C	Q08734	132 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	MID2	P36027	376 aa		3.68	□□□□□ -1.82
SIS2	YKR072C	DUR1,2	P32528	1835 aa	Known RBP	3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms