RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W SCW10Q04951 389 aa3.7□□□□□ -1.82
UBP7YIL156W YBR220CP38318 560 aa3.7□□□□□ -1.82
UBP7YIL156W YCR101CP25607 182 aa3.69□□□□□ -1.82
UBP7YIL156W YRA2P36036 203 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
UBP7YIL156W SMD3P43321 101 aaKnown RBP3.69□□□□□ -1.82
UBP7YIL156W YFR045WP43617 309 aa3.69□□□□□ -1.82
UBP7YIL156W NSP1P14907 823 aaKnown RBP3.69□□□□□ -1.82
UBP7YIL156W SHB17P36136 271 aaKnown RBP3.69□□□□□ -1.82
UBP7YIL156W BOL1Q3E793 110 aa3.69□□□□□ -1.82
UBP7YIL156W HTD2P38790 280 aaKnown RBP3.68□□□□□ -1.82
UBP7YIL156W SBH1P52870 82 aa3.68□□□□□ -1.82
UBP7YIL156W YNL033WP53964 284 aa3.68□□□□□ -1.82
UBP7YIL156W YNL019CP53975 284 aa3.68□□□□□ -1.82
UBP7YIL156W UBR2Q07963 1872 aa3.68□□□□□ -1.82
UBP7YIL156W LHP1P33399 275 aaKnown RBP3.68□□□□□ -1.82
UBP7YIL156W SFT1P43682 97 aa3.68□□□□□ -1.82
UBP7YIL156W YGR026WP53217 278 aa3.68□□□□□ -1.82
UBP7YIL156W YPR114WQ06107 315 aa3.68□□□□□ -1.82
UBP7YIL156W YLR118CQ12354 227 aa3.68□□□□□ -1.82
UBP7YIL156W SAS5Q99314 248 aa3.68□□□□□ -1.82
UBP7YIL156W POR1P04840 283 aaKnown RBP3.67□□□□□ -1.82
UBP7YIL156W SUI1P32911 108 aaKnown RBP3.67□□□□□ -1.82
UBP7YIL156W BUD25P85052 153 aa3.67□□□□□ -1.82
UBP7YIL156W RIF1P29539 1916 aa3.67□□□□□ -1.82
UBP7YIL156W SNC2P33328 115 aa3.67□□□□□ -1.82
UBP7YIL156W VPS28Q02767 242 aa3.67□□□□□ -1.82
UBP7YIL156W YOR268CQ08734 132 aa3.67□□□□□ -1.82
UBP7YIL156W FYV7Q12247 151 aa3.67□□□□□ -1.82
UBP7YIL156W HIS3P06633 220 aa3.66□□□□□ -1.82
UBP7YIL156W BUD23P25627 275 aaPredicted RBP3.66□□□□□ -1.82
UBP7YIL156W UMP1P38293 148 aa3.66□□□□□ -1.82
UBP7YIL156W FKS1P38631 1876 aaKnown RBP3.66□□□□□ -1.82
UBP7YIL156W YBR032WP38223 100 aa3.66□□□□□ -1.82
UBP7YIL156W YGR017WP53210 297 aa3.66□□□□□ -1.82
UBP7YIL156W MRPS8Q03799 155 aa3.66□□□□□ -1.82
UBP7YIL156W YDR391CQ04170 232 aa3.66□□□□□ -1.82
UBP7YIL156W RPL14AP36105 138 aaKnown RBP3.66□□□□□ -1.82
UBP7YIL156W YKR070WP36151 352 aaKnown RBP3.66□□□□□ -1.82
UBP7YIL156W RPL14BP38754 138 aaKnown RBP3.66□□□□□ -1.82
UBP7YIL156W NSA2P40078 261 aaKnown RBP3.66□□□□□ -1.82
UBP7YIL156W EST3Q03096 181 aa3.66□□□□□ -1.82
UBP7YIL156W AIM36Q03798 255 aa3.66□□□□□ -1.82
UBP7YIL156W SYM1Q06563 197 aa3.66□□□□□ -1.82
UBP7YIL156W ATP20Q12233 115 aa3.66□□□□□ -1.82
UBP7YIL156W NMT1P14743 455 aa3.65□□□□□ -1.82
UBP7YIL156W AHT1P29589 182 aa3.65□□□□□ -1.82
UBP7YIL156W YEL028WP39989 153 aa3.65□□□□□ -1.82
UBP7YIL156W COA4Q05809 96 aa3.65□□□□□ -1.82
UBP7YIL156W YTH1Q06102 208 aaPredicted RBP3.65□□□□□ -1.82
UBP7YIL156W UIP4Q08926 304 aa3.65□□□□□ -1.82
UBP7YIL156W YHL026CP38740 315 aa3.65□□□□□ -1.83
UBP7YIL156W AIM11P87275 137 aa3.65□□□□□ -1.83
UBP7YIL156W MOT1P32333 1867 aa3.65□□□□□ -1.83
UBP7YIL156W RAD6P06104 172 aa3.64□□□□□ -1.83
UBP7YIL156W ADK1P07170 222 aaKnown RBP3.64□□□□□ -1.83
UBP7YIL156W MID2P36027 376 aa3.64□□□□□ -1.83
UBP7YIL156W SPC25P40014 221 aa3.64□□□□□ -1.83
UBP7YIL156W MPC3P53311 146 aa3.64□□□□□ -1.83
UBP7YIL156W PIN3Q06449 215 aa3.64□□□□□ -1.83
UBP7YIL156W FSF1Q12029 327 aaKnown RBP3.64□□□□□ -1.83
UBP7YIL156W MSW1P04803 379 aa3.64□□□□□ -1.83
UBP7YIL156W YKR032WP36127 104 aa3.64□□□□□ -1.83
UBP7YIL156W EAF6P47128 113 aa3.64□□□□□ -1.83
UBP7YIL156W HSP12P22943 109 aaKnown RBP3.63□□□□□ -1.83
UBP7YIL156W YBL010CP32788 280 aa3.63□□□□□ -1.83
UBP7YIL156W YNR062CP53748 327 aa3.63□□□□□ -1.83
UBP7YIL156W TMA23Q03525 211 aa3.63□□□□□ -1.83
UBP7YIL156W YDR102CQ03864 110 aa3.63□□□□□ -1.83
UBP7YIL156W DDI2P0CH63 225 aa3.63□□□□□ -1.83
UBP7YIL156W DDI3P0CH64 225 aa3.63□□□□□ -1.83
UBP7YIL156W PDX3P38075 228 aaKnown RBP3.63□□□□□ -1.83
UBP7YIL156W CUP9P41817 306 aa3.63□□□□□ -1.83
UBP7YIL156W MAK31P23059 88 aa3.63□□□□□ -1.83
UBP7YIL156W PCL1P24867 279 aa3.63□□□□□ -1.83
UBP7YIL156W YMR295CQ03559 197 aa3.63□□□□□ -1.83
UBP7YIL156W YMR253CQ04835 414 aa3.63□□□□□ -1.83
UBP7YIL156W YBR242WP38331 238 aa3.62□□□□□ -1.83
UBP7YIL156W HAL1Q01766 294 aa3.62□□□□□ -1.83
UBP7YIL156W HSP26P15992 214 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
UBP7YIL156W ANT1Q06497 328 aa3.61□□□□□ -1.83
UBP7YIL156W SAE3P89114 91 aa3.61□□□□□ -1.83
UBP7YIL156W YPR063CQ12160 140 aa3.61□□□□□ -1.83
UBP7YIL156W RRT1P38192 103 aa3.61□□□□□ -1.83
UBP7YIL156W YFL012WP43580 148 aa3.61□□□□□ -1.83
UBP7YIL156W RPL22BP56628 122 aaKnown RBP3.61□□□□□ -1.83
UBP7YIL156W SHH3Q04487 196 aa3.61□□□□□ -1.83
UBP7YIL156W CWC27Q02770 301 aa3.6□□□□□ -1.83
UBP7YIL156W DML1Q03652 475 aa3.6□□□□□ -1.83
UBP7YIL156W DDR48P18899 430 aaKnown RBP3.6□□□□□ -1.83
UBP7YIL156W YEL045CP32616 141 aa3.6□□□□□ -1.83
UBP7YIL156W GEP7P53171 287 aa3.6□□□□□ -1.83
UBP7YIL156W PAM17P36147 197 aa3.59□□□□□ -1.83
UBP7YIL156W YER135CP40082 130 aa3.59□□□□□ -1.83
UBP7YIL156W PIR5P46999 287 aa3.59□□□□□ -1.83
UBP7YIL156W TMC1Q08422 150 aaPredicted RBP3.59□□□□□ -1.83
UBP7YIL156W YHR180WP38868 163 aa3.59□□□□□ -1.83
UBP7YIL156W RPS12P48589 143 aaKnown RBP3.59□□□□□ -1.83
UBP7YIL156W DOC1P53068 250 aa3.59□□□□□ -1.83
UBP7YIL156W EMC4P53073 190 aa3.59□□□□□ -1.83
UBP7YIL156W TVP18Q04767 167 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 83.1 ms